Are short, low-barrier hydrogen bonds unusually strong?

Acc Chem Res

Department of Chemistry & Biochemistry, University of California-San Diego, La Jolla, California 92093-0358, USA.

Published: December 2010

In a symmetric hydrogen bond (H-bond), the hydrogen atom is perfectly centered between the two donor atoms. The energy diagram for hydrogen motion is thus a single-well potential, rather than the double-well potential of a more typical H-bond, in which the hydrogen is covalently bonded to one atom and H-bonded to the other. Examples of symmetric H-bonds are often found in crystal structures, and they exhibit the distinctive feature of unusually short length: for example, the O-O distance in symmetric OHO H-bonds is found to be less than 2.5 Å. In comparison, the O-O distance in a typical asymmetric H-bond, such as ROH···OR(2), ranges from about 2.7 to 3.0 Å. In this Account, we briefly review and update our use of the method of isotopic perturbation to search for a symmetric, centered, or single-well-potential H-bond in solution. Such low-barrier H-bonds are thought to be unusually strong, owing perhaps to the resonance stabilization of two identical resonance forms [A-H···B ↔ A···H-B]. This presumptive bond strength has been invoked to explain some enzyme-catalyzed reactions. Yet in solution, a wide variety of OHO, OHN, and NHN H-bonds have all been found to be asymmetric, in double-well potentials. Examples include the monoanion of (±)-2,3-di-tert-butylsuccinic acid and a protonated tetramethylnaphthalenediamine, even though these two ions are often considered prototypes of species with strong H-bonds. In fact, all of the purported examples of strong, symmetric H-bonds have been found to exist in solution as pairs of asymmetric tautomers, in contrast to their symmetry in some crystals. The asymmetry can be attributed to the disorder of the local solvation environment, which leads to an equilibrium among solvatomers (that is, isomers that differ in solvation). If the disorder of the local environment is sufficient to break symmetry, then symmetry itself is not sufficient to stabilize the H-bond, and symmetric H-bonds do not have an enhanced stability or an unusual strength. Nor are short H-bonds unusually strong. We discuss previous evidence for "short, strong, low-barrier" H-bonds and show it to be based on ambiguous comparisons. The role of such H-bonds in enzyme-catalyzed reactions is then ascribed not to any unusual strength of the H-bond itself but to relief of "strain."

Download full-text PDF

Source
http://dx.doi.org/10.1021/ar100097jDOI Listing

Publication Analysis

Top Keywords

symmetric h-bonds
12
h-bonds
10
h-bond hydrogen
8
o-o distance
8
unusually strong
8
enzyme-catalyzed reactions
8
disorder local
8
unusual strength
8
symmetric
6
h-bond
6

Similar Publications

Water is characterized by strong intermolecular hydrogen bonds (H-bonds) between molecules. The two hydrogen atoms in one water molecule can form H-bonds of dissimilar length. Although intimately connected to water's anomalous properties, the details and the origins of the asymmetry have remained elusive.

View Article and Find Full Text PDF

Tripodal ligands that can encapsulate single or multiple metal sites in -symmetric geometric configurations constitute valuable targets for novel catalysts. Of particular interest in ligand development are efforts toward incorporating apical elements that exhibit little if any electron donicity, to enhance the electrophilic nature of a positioned active oxidant (, metal-oxo, -nitrene). The tripodal ligand TMGtrphen-Arene has been synthesized, featuring an arene platform 1,3,5-substituted with phenylene arms possessing tetramethylguanidinyl (TMG) residues.

View Article and Find Full Text PDF

Zincophilic Sites Enriched Hydrogen-Bonded Organic Framework as Multifunctional Regulating Interfacial Layers for Stable Zinc Metal Batteries.

Angew Chem Int Ed Engl

September 2024

School of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, P. R. China, 200444.

To construct an efficient regulating layer for Zn anodes that can simultaneously address the issues of dendritic growth and side reactions is highly demanded for stable zinc metal batteries (ZMBs). Herein, we fabricate a hydrogen-bonded organic framework (HOF) enriched with zincophilic sites as a multifunctional layer to regulate Zn anodes with controlled spatial ion flux and stable interfacial chemistry (MA-BTA@Zn). The framework with abundant H-bonds helps capture HO and remove the solvated shells on [Zn(HO)], leading to suppressed side reactions.

View Article and Find Full Text PDF

The pathways for the reactions of aluminum oxide cluster ions with ethane have been measured. For selected ions (AlO, AlO , AlO , AlO ) the structure of the collisionally-stabilized reaction intermediates were explored by measuring the photodissociation vibrational spectra from 2600 cm-3100 cm. Density functional theory was used to calculate features of the potential energy surfaces for the reactions and the vibrational spectra of intermediates.

View Article and Find Full Text PDF

Palladium-Catalyzed Selective γ-Monoarylation of Free Amines Containing Symmetric γ-C-H Controlled by a Transient Directing Group.

Org Lett

July 2024

State Key Laboratory of Molecular Chemistry for Drug, Hebei Collaborative Innovation Center of New Drug Creation, Hebei University of Science & Technology, Shijiazhuang 050018, P. R. China.

We developed a new transient directing group, -(2-benzoyl-4-chlorophenyl)-1,1,1-trifluoromethanesulfonamide, which can facilitate the γ-monoarylation of free amines containing symmetric γ-C-H bonds. A variety of amines containing symmetric and identical γ-C(sp)-H and γ-C(sp)-H reacted with a diverse range of aryl and heteroaryl iodides to provide γ-monoarylated products exclusively.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!