The aim of this research was to investigate whether the chemical changes induced by mechanical damage and aging of mushrooms can be (a) detected in the midinfrared absorption region and (b) identified using chemometric data analysis. Mushrooms grown under controlled conditions were bruise-damaged by vibration to simulate damage during normal transportation. Damaged and nondamaged mushrooms were stored for up to 7 days postharvest. Principal component analysis of Fourier transform infrared (FTIR) spectra showed evidence that physical damage had an effect on the tissue structure and the aging process. Random forest classification models were used to predict damage in mushrooms producing models with error rates of 5.9 and 9.8% with specific wavenumbers identified as important variables for identifying damage, and partial least-squares (PLS) models were developed producing models with low levels of misclassification. Modeling postharvest age in mushrooms using random forests and PLS resulted in high error rates and misclassification; however, random forest models had the ability to correctly classify 82% of day zero samples, which may be a useful tool in discriminating between "fresh" and old mushrooms. This study highlights the usefulness of FTIR spectroscopy coupled with chemometric data analysis in particular for evaluating damage in mushrooms and with the possibility of developing a monitoring system for damaged mushrooms using the FTIR "fingerprint" region.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1021/jf101123a | DOI Listing |
Microb Pathog
January 2025
HEJ Research Institute of Chemistry, International Center for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi Pakistan, 75270; Dr. Panjwani Center for Molecular Medicine and Drug Research (PCMD), International Center for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi Pakistan, 75270. Electronic address:
Antimicrobial resistance (AMR) poses significant challenges to global public health. The major cause of AMR development is previous use of antibiotics, hospitalization, and the lack of efficient methods for screening AMR pathogens. Mass spectrometry techniques offer rapid, sensitive, and early detection of AMR both on proteomics and metabolomics levels.
View Article and Find Full Text PDFAnal Chem
January 2025
State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha 410082, China.
Small molecule near-infrared (NIR) fluorophores play a critical role in disease diagnosis and early detection of various markers in living organisms. To accelerate their development and design, a deep learning platform, NIRFluor, was established to rapidly screen small molecule NIR fluorophores with the desired optical properties. The core component of NIRFluor is a state-of-the-art deep learning model trained on 5179 experimental big data.
View Article and Find Full Text PDFAnal Methods
January 2025
Program in Chemical and Biochemical Process Engineering, School of Chemistry, Federal University of Rio de Janeiro, Cidade Universitária, Rio de Janeiro, CEP 21941-909, Brazil.
Low-carbon fuels, emitting less carbon than fossil fuels, are proposed to help in the transition to a sustainable, decarbonized transport sector. The new biofuels being studied and developed in this context include hydrotreated vegetable oils (HVO). Its chemical composition, which is the same as fossil diesel (primarily composed of linear chain hydrocarbons C12-C24), makes HVO (more homogeneous mixtures of paraffinic hydrocarbons C10-C20, containing no sulfur or aromatics) a fuel with slightly lower density than fossil diesel due to these characteristics.
View Article and Find Full Text PDFData Brief
February 2025
Woodwell Climate Research Center, 149 Woods Hole Rd., Falmouth, MA, 02540, United States.
This near-infrared spectral dataset consists of 2,106 diverse mineral soil samples scanned, on average, on six different units of the same low-cost commercially available handheld spectrophotometer. Most soil samples were selected from the USDA NRCS National Soil Survey Center-Kellogg Soil Survey Laboratory (NSSC-KSSL) soil archives to represent the diversity of mineral soils (0-30 cm) found in the United States, while 90 samples were selected from Ghana, Kenya, and Nigeria to represent available African soils in the same archive. All scanning was performed on dried and sieved (<2 mm) soil samples.
View Article and Find Full Text PDFBrief Bioinform
November 2024
College of Computer Science and Electronic Engineering, Hunan University, Changsha 410082, China.
The role of cell-cell communications (CCCs) is increasingly recognized as being important to differentiation, invasion, metastasis, and drug resistance in tumoral tissues. Developing CCC inference methods using traditional experimental methods are time-consuming, labor-intensive, cannot handle large amounts of data. To facilitate inference of CCCs, we proposed a computational framework, called CellMsg, which involves two primary steps: identifying ligand-receptor interactions (LRIs) and measuring the strength of LRIs-mediated CCCs.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!