AI Article Synopsis

  • Legacy text formats continue to be significant in mass spectrometry data processing workflows, even as the field tries to adopt modern file formats.
  • The authors introduce a formal grammar and a C++ parser implementation for the Mascot Generic Format (MGF).
  • The software and technical documentation for the MGF parser can be accessed at http://software.steenlab.org/mgfp/.

Article Abstract

Despite the efforts of the mass spectrometry (MS) community to migrate data representation toward modern file formats, legacy text formats still play an important role in MS data processing workflows. We provide a formal grammar and a portable, efficient C++ implementation for a Mascot Generic Format (MGF) parser. Software and technical documentation are available from http://software.steenlab.org/mgfp/.

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http://dx.doi.org/10.1021/pr100118fDOI Listing

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