Design of non-nucleoside inhibitors of HIV-1 reverse transcriptase is being pursued with the assistance of free energy perturbation (FEP) calculations to predict relative free energies of binding. Extension of azole-containing inhibitors into an 'eastern' channel between Phe227 and Pro236 has led to the discovery of potent and structurally novel derivatives.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2880392PMC
http://dx.doi.org/10.1016/j.bmcl.2010.03.006DOI Listing

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