A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3122
Function: getPubMedXML

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

Comparative analysis of the genomes of Bombyx mandarina and Bombyx mori nucleopolyhedroviruses. | LitMetric

Comparative analysis of the genomes of Bombyx mandarina and Bombyx mori nucleopolyhedroviruses.

J Microbiol

Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Zhejiang University, Hangzhou, P R China.

Published: February 2010

AI Article Synopsis

  • The BomaNPV S1 strain is less virulent than the BmNPV T3 strain in infecting the silkworm, Bombyx mori.
  • The complete genome of BomaNPV S1, which is 126,770 nucleotides long, was sequenced and found to have high similarity to the BmNPV T3 strain, with 133 potential ORFs identified.
  • Differences were noted in specific genes, with BomaNPV S1 lacking the bro-b and bro-e genes and variations observed in repeat units, suggesting that these strains may be variants of each other and highlighting the potential role of genetic differences in baculovirus strain diversity.

Article Abstract

The Bombyx mandarina nucleopolyhedrovirus (BomaNPV) S1 strain can infect the silkworm, Bombyx mori, but is significantly less virulent than B. mori nucleopolyhedrovirus (BmNPV) T3 strain. The complete nucleotide sequence of the S1 strain of BomaNPV was determined and compared with the BmNPV T3 strain. The circular, double stranded DNA genome of the S1 strain was 126,770 nucleotides long (GenBank accession no. FJ882854), with a G+C content of 40.23%. The genome contained 133 potential ORFs. Most of the putative proteins were more than 96% identical to homologs in the BmNPV T3 strain, except for bro-a, lef-12, bro-c, and bro-d. Compared with the BmNPV T3 strain, however, this genome did not encode the bro-b and bro-e genes. In addition, hr1 lacked two repeat units, while hr2L, hr2R, hr3, hr4L, hr4R, and hr5 were similar to the corresponding hrs in the T3 strain. The sequence strongly suggested that BomaNPV and BmNPV are variants with each other, and supported the idea that baculovirus strain heterogeneity may often be caused by variation in the hrs and bro genes.

Download full-text PDF

Source
http://dx.doi.org/10.1007/s12275-009-0197-4DOI Listing

Publication Analysis

Top Keywords

bmnpv strain
16
strain
9
bombyx mandarina
8
bombyx mori
8
compared bmnpv
8
bmnpv
5
comparative analysis
4
analysis genomes
4
bombyx
4
genomes bombyx
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!