An approximation for treating multiple quantum nuclei within the nuclear-electronic orbital (NEO) framework for molecular systems is presented. In the approximation to NEO-Hartree-Fock, the nuclear wave function is represented by a Hartree product rather than a Slater determinant, corresponding to the neglect of the nuclear exchange interactions. In the approximation to NEO-density functional theory, the nuclear exchange-correlation functional is chosen to be the diagonal nuclear exchange interaction terms, thereby eliminating the nuclear self-interaction terms. To further enhance the simplicity and computational efficiency, the nuclear molecular orbitals or Kohn-Sham orbitals are expanded in terms of localized nuclear basis sets. These approximations are valid because of the inherent localization of the nuclear orbitals and the numerical insignificance of the nuclear exchange interactions in molecular systems. Moreover, these approximations lead to substantial computational savings due to the reduction in both the number of integrals that must be calculated and the size of the matrices that must be diagonalized. These nuclear Hartree product approximation (HPA) methods scale linearly with the number of quantum protons and are highly parallelizable. Applications to a water hexamer, glycine dimer, and 32-water cluster, where all hydrogen nuclei are treated quantum mechanically, illustrate the accuracy and computational efficiency of the nuclear HPA methods. These strategies will facilitate the implementation of explicitly correlated NEO methods for molecular systems with multiple quantum protons.
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http://dx.doi.org/10.1063/1.3332769 | DOI Listing |
Molecules
December 2024
Faculty of Applied Physics and Mathematics, Gdańsk University of Technology, ul. Gabriela Narutowicza 11/12, 80-233 Gdańsk, Poland.
The total cross-sections for the single electron-impact ionization of pyrimidine (CHN), 2-chloropyrimidine (2-CHClN), 5-chloropyrimidine (5-CHClN), 2-bromopyrimidine (2-CHBrN) and 5-bromopyrimidine (5-CHBrN) molecules have been calculated with the binary-encounter-Bethe model from the ionization threshold up to 5 keV. The input data for the BEB calculations concerning electronic structure of the studied targets have been obtained with quantum chemical methods including the Hartree-Fock (H-F) and the outer valence Green function (OVGF) methods. The calculated cross-section for the ionization of the pyrimidine molecules due to electron impact is compared with available experimental and theoretical data.
View Article and Find Full Text PDFJ Chem Theory Comput
December 2024
School of Computing and Information Systems, Melbourne University, Melbourne, VIC 3052, Australia.
This Article presents two optimized multi-GPU algorithms for Fock matrix construction, building on the work of Ufimtsev and Martinez [ 2009, 5, 1004-1015] and Barca et al. [ 2021, 17, 7486-7503]. The novel algorithms, opt-UM and opt-Brc, introduce significant enhancements, including improved integral screening, exploitation of sparsity and symmetry, a linear scaling exchange matrix assembly algorithm, and extended capabilities for Hartree-Fock caculations up to -type angular momentum functions.
View Article and Find Full Text PDFJ Chem Phys
November 2024
MTA-SZTE Lendület "Momentum" Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
J Phys Chem A
November 2024
Department of Chemistry, Northwestern Polytechnical University, West Youyi Road 127, Xi'an 710072, China.
In this work, we consider the question how to detect the planar tetracoordination hydrogen geometry which was recently proposed by electronic structure calculations on the InH system ( , , e202317312; e202400927; e202403214). Keeping the symmetry, a two-dimensional model of InH is designed to build the nonadiabatic Hamiltonian operator with the lowest-lying singlet and triplet states coupled with spin-orbit coupling. The electronic energies in fitting the potential energy matrix are computed at either the MRCI or CCSD (T) level.
View Article and Find Full Text PDFJ Chem Theory Comput
October 2024
TUM School of Natural Sciences, Technische Universität München, 85748 Garching bei München, Germany.
The excited-state dynamics of organic molecules, molecular aggregates, and donor-acceptor clusters is typically governed by the interplay of electronic excitations and, due to their flexibility and soft bonding, by the interaction with their vibrations. This interaction in these systems can be characterized by a few relevant electronic states that are coupled to numerous vibrational normal modes, encompassing a vast configurational space of the molecules. The full quantum simulation of these type of systems has been long dominated by the multiconfiguration time-dependent Hartree (MCTDH) approach and its multilayer variants, which are considered the gold standard in the presence of electron-vibration coupling with a large number of modes.
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