A supramolecular tandem assay for direct continuous monitoring of nucleotide triphosphate-dependent enzymes such as potato apyrase is described. The underlying principle of the assay relies on the use of anion-receptor macrocycles in combination with fluorescent dyes as reporter pairs. A combinatorial approach was used to identify two complementary reporter pairs, i.e. an amino-gamma-cyclodextrin with 2-anilinonaphtalene-6-sulfonate (ANS) as dye (fluorescence enhancement factor of 17 upon complexation) and a polycationic cyclophane with 8-hydroxy-1,3,6-pyrene trisulfonate (HPTS) as dye (fluorescence decrease by a factor of more than 2000), which allow the kinetic monitoring of potato apyrase activity at different ATP concentration ranges (microM and mM) with different types of photophysical responses (switch-ON and switch-OFF). Competitive fluorescence titrations revealed a differential binding of ATP (strongest competitor) versus ADP and AMP, which constitutes the prerequisite for monitoring enzymatic conversions (dephosphorylation or phosphorylation) involving nucleotides. The assay was tested for different enzyme and substrate concentrations and exploited for the screening of activating additives, namely divalent transition metal ions (Ni(2+), Mg(2+), Mn(2+), and Ca(2+)). The transferability of the assay could be demonstrated by monitoring the dephosphorylation of other nucleotide triphosphates (GTP, TTP, and CTP).
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http://dx.doi.org/10.1039/b925192h | DOI Listing |
J Am Chem Soc
January 2025
School of Chemistry, The University of Sydney, Sydney, NSW 2006, Australia.
Designing molecular receptors that bind anions in water is a significant challenge, and an even greater difficulty lies in using these receptors to remove anions from water without resorting to the hazardous liquid-liquid extraction approach. We here demonstrate an effective and synthetically simple strategy toward these goals by exploiting ion-pair assembly of macrocycles. Our anion binding ensemble consists of an octa-chloro tetra-urea macrocyclic anion receptor (ClTU), which forms water-dispersible aggregates, and a tetra-cationic fluorescent dye 5,10,15,20-tetrakis(1-methyl-4-pyridinio)porphyrin (TMPyP4), which provides Coulombic stabilization and fluorescence reporting of anion binding in an ion-pair assembly.
View Article and Find Full Text PDFAngew Chem Int Ed Engl
January 2025
Universite Libre de Bruxelles, Engineering of Molecular NanoSystems, Avenue F. Roosevelt 50, 1050, Brussels, BELGIUM.
Artificial anion transporters offer a potential way to treat deficiencies in cellular anion transport of genetic origins. In contrast to the large variety of mobile anion carriers and self-assembled anion channels reported, unimolecular anion channels are less investigated. Herein, we present a unique example of a unimolecular anion channel based on a bambusuril (BU) macrocycle, a well-established anion receptor.
View Article and Find Full Text PDFOrg Biomol Chem
November 2024
Department of Organic Chemistry, University of Chemistry and Technology, Prague (UCTP), Technicka 5, 166 28 Prague 6, Czech Republic.
Calix[4]arenes bearing urea units at the position(s) of the upper rim of the macrocyclic skeleton were prepared by the reaction of the corresponding amines with aryl isocyanates. As shown by the H NMR and UV/vis titration experiments, these systems are capable of effectively complexing selected anions even in a highly competitive environment (such as DMSO-). While the monoureido derivatives showed approximately the same complexation ability irrespective of the substitution ( isomers), the bisureas at the upper rim demonstrated interesting differences in complexation.
View Article and Find Full Text PDFAngew Chem Int Ed Engl
February 2023
Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
A water-soluble coordination cage was obtained by reaction of Pd(NO ) with a 1,3-di(pyridin-3-yl)benzene ligand featuring a short PEG chain. The cavity of the metal-organic cage contains one nitrate anion, which is readily replaced by chloride. The apparent association constant for chloride binding in buffered aqueous solution is K =1.
View Article and Find Full Text PDFDalton Trans
November 2022
Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan.
Rotaxanes, which are composed of ring and axle components, are important interlocked molecules with wide applications such as molecular machines and switchable catalysts. The construction of interlocked structures targeting anions is an important issue, as evidenced by the fact that anionic groups are usually abundant in many biomacromolecules. We now report an allosteric pseudomacrocyclic anion receptor as a ring that spontaneously generates a rotaxane in an auto-clipping way, which does not require the successive ring forming reaction like usual clipping, in the presence of an axle with an anionic station.
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