DNA barcoding: a six-question tour to improve users' awareness about the method.

Brief Bioinform

ZooPlantLab, Dipartimento di Biotecnologie e Bioscienze, Università degli Studi di Milano Bicocca, Piazza della Scienza 2 - 20126, Milan, Italy.

Published: July 2010

AI Article Synopsis

  • DNA barcoding is a modern method used to identify species by analyzing genetic material, playing a significant role in taxonomy and bioinformatics.
  • It relies on standardized techniques, with the Barcode of Life Data Systems serving as a reference point, but various alternative methods are also emerging from the scientific community.
  • The text emphasizes the importance of users understanding the implications of their methods and decisions through a set of six key questions designed to enhance awareness about DNA barcoding practices and available tools.

Article Abstract

DNA barcoding is a recent and widely used molecular-based identification system that aims to identify biological specimens, and to assign them to a given species. However, DNA barcoding is even more than this, and besides many practical uses, it can be considered the core of an integrated taxonomic system, where bioinformatics plays a key role. DNA barcoding data could be interpreted in different ways depending on the examined taxa but the technique relies on standardized approaches, methods and analyses. The existing reference towards a common way to treat DNA barcoding data, analyses and results is the Barcode of Life Data Systems. However, the scientific community has produced in the recent years a number of alternative methods to manage barcoding data. The present work starts from this point, because users should be aware of the consequences their choices produce on the results. Despite the fact that a strict standardization is the essence of DNA barcoding, we propose a tour of six questions to improve the users' awareness about the method, the correct use of concepts and alternative tools provided by scientific community.

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Source
http://dx.doi.org/10.1093/bib/bbq003DOI Listing

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