In this study, Gasterophilus intestinalis and Gasterophilus nasalis collected from horses in northeastern Poland and southern Italy were genetically compared. The cox1 sequences of the Polish and Italian G. nasalis larvae revealed a higher degree of geographic genetic diversity, with an intra-specific variation rate of 1.27%, than the G. nasalis specimens collected in Poland (intra-specific variation rate: 0.49%) and those collected in Italy (intra-specific variation rate: 0.58%). However, the level of genetic homology of the Polish and Italian G. intestinalis specimens (intra-specific variation rate: 1.27%) was similar to that of the G. intestinalis larvae collected in northeastern Poland (intra-specific variation rate: 0.94%) and those collected in southern Italy (intra-specific variation rate: 1.16%). Analysis of the restriction enzyme sites in the coxI gene of G. nasalis and G. intestinalis showed that the nucleotide polymorphism (NP) at position 1050 of this gene determines cleavage by MnlI only in G. nasalis, making it possible to differentiate the two species using PCR-RFLP. Interestingly, comparison of the nucleotide sequences of the PCR-amplified coxI gene fragments from the Italian specimens of G. nasalis with other analyzed cox1 genes revealed an additional NP at position 1236 of cox1 gene, recognized by MnlI. The present study shows that G. nasalis specimens from different geographical areas display a level of genetic diversity which can influence PCR-RFLP analysis.
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http://dx.doi.org/10.1016/j.vetpar.2009.12.030 | DOI Listing |
Evol Anthropol
March 2025
Center for the Advanced Study of Human Paleobiology, George Washington University, Washington DC, USA.
Nat Commun
December 2024
Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St Lucia, Queensland, 4072, Australia.
The relationship between intra-specific and inter-specific patterns and processes over evolutionary time is key to ecological investigations. We examine this relationship taking an approach of focussing on the association between vegetation and floristic classifications, summaries of inter-specific processes, and intra-specific genetic structuring. Applying an innovative, multispecies, and standardised population genomic approach, we test the relationship between vegetation mapping schemes and structuring of genetic variation across a large, environmentally heterogenous region in eastern Australia.
View Article and Find Full Text PDFTree Physiol
December 2024
Université du Québec à Chicoutimi, laboratoire écosystèmes terrestres boréaux (EcoTer) Chicoutimi, Québec, Canada.
In temperate and boreal ecosystems, trees undergo dormancy to avoid cold temperatures during the unfavorable season. This phase includes changes in frost hardiness, which is minimal during the growing season and reaches its maximum in winter. Quantifying frost hardiness is important to assess the frost risk and shifts of species distribution under a changing climate.
View Article and Find Full Text PDFMol Ecol
December 2024
Ecology and Evolutionary Biology Group, School of Biological Sciences, University of Auckland, Auckland, Aotearoa, New Zealand.
The field of conservation genomics is becoming increasingly interested in whether, and how, structural variant (SV) genotype information can be leveraged in the management of threatened species. The functional consequences of SVs are more complex than for single nucleotide polymorphisms (SNPs), as SVs typically impact a larger proportion of the genome due to their size and thus may be more likely to contribute to load. While the impacts of SV-specific genetic load may be less consequential for large populations, the interplay between weakened selection and stochastic processes means that smaller populations, such as those of the threatened Aotearoa hihi/New Zealand stitchbird (Notiomystis cincta), may harbour a high SV load.
View Article and Find Full Text PDFRes Sq
December 2024
Institute for Genome Sciences, Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD.
The interplay of stochastic and ecological processes that govern the establishment and persistence of host-associated microbial communities is not well understood. Here we illustrate the conceptual and practical advantages of fitting stochastic population dynamics models to multi-species bacterial time series data. We show how the stability properties, fluctuation regimes and persistence probabilities of human vaginal microbial communities can be better understood by explicitly accommodating three sources of variability in ecological stochastic models of multi-species abundances: 1) stochastic biotic and abiotic forces, 2) ecological feedback and 3) sampling error.
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