In counting chromosome aberrations at low-dose radiation exposure in biological dosimetry, an automation technique has been required to process a large number of sample preparations. The metaphase finder is an automated optical microscope system, which automatically scans and finds metaphase cells on the slide glass in low magnification and relocates metaphase cells to the center of the field of view of the microscope to observe chromosomes in high magnification. The authors have constructed a cost-effective metaphase finder system by assembling commercially-available components, such as microscopes, motorized sample stages, personal computers and general-purpose image analysis software, instead of purchasing one dedicated system. The new system has high cost-effectiveness and high flexibility in adapting to the new staining methods. Mathematical morphology-based image processing to the algorithm was used to find metaphase cells. In particular, the morphology for the gray-image was used for the newest version. The performance of this metaphase finder system was tested. The new machines were distributed to six institutes of the Chromosome Network for Biodosimetry in Japan for testing the new algorithm for practical use. The scanning speed was 14.5 to 18.1 min cm2. The system was slower than several commercial metaphase finders, but there were few false positives. This system is economical and satisfactory for practical use.
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http://dx.doi.org/10.1097/HP.0b013e3181b357c1 | DOI Listing |
Radiat Prot Dosimetry
September 2023
Department of Accelerator and Medical Physics, Institute for Quantum Medical Science, National Institutes for Quantum and Radiological Science and Technology, 4-9-1 Anagawa, Inage-ku, Chiba 263-8555, Japan.
Biological dosimetry is used to estimate one's dose by biological phenomena. The most popular and 'gold standard' phenomenon is the appearance of dicentric chromosomes in metaphases. The metaphase finder is a tool for biological dosimetry that finds metaphase cells on glass slides.
View Article and Find Full Text PDFBio Protoc
May 2021
Department of Biochemistry and Molecular Genetics, University of Virginia School of Medicine, Charlottesville, VA 22908, USA.
Recent studies from multiple labs including ours have demonstrated the importance of extrachromosomal circular DNA (eccDNA) from yeast to humans ( Shibata , 2012 ; Dillon , 2015 ; Møller , 2016 ; Kumar , 2017 ; Turner , 2017 ; Kim , 2020 ). More recently, it has been found that cancer cells obtain a selective advantage by amplifying oncogenes on eccDNA, which drives genomic instability ( Wu , 2019 ; Kim , 2020 ). Previously, we have purified circular DNA and enriched the population using rolling circle amplification followed by high-throughput sequencing for the identification of eccDNA based on the unique junctional sequence.
View Article and Find Full Text PDFHealth Phys
July 2020
Scientific Research Department, Armed Forces Radiobiology Research Institute (AFRRI), Uniformed Services University of the Health Sciences (USUHS), Bethesda, MD 20889-5648.
The objective of this study was to establish radiation dose-response calibration curves using automated dicentric scoring to support rapid and accurate cytogenetic triage dose-assessment. Blood was drawn from healthy human volunteers and exposed to Co gamma rays at several dose rates (i.e.
View Article and Find Full Text PDFRadiat Prot Dosimetry
December 2019
National Institutes for Quantum and Radiological Science and Technology, 4-9-1 Anagawa, Inage-ku, Chiba, Japan.
Biological dosimetry is used to estimate individual absorbed radiation dose by quantifying an appropriate biological marker. The most popular gold-standard marker is the appearance of dicentric chromosomes in metaphase. The metaphase finder is a tool for biological dosimetry that finds metaphase cells on glass slides.
View Article and Find Full Text PDFRadiat Prot Dosimetry
December 2016
National Institutes for Quantum and Radiological Science and Technology, 4-9-1 Anagawa, Inage-ku, Chiba 263-8555, Japan
The most popular and 'gold standard' phenomenon in Biological dosimetry is the appearance of dicentric chromosomes in metaphase in white blood cells. The metaphase finder is a tool for biological dosimetry that finds metaphase cells on slide glasses. The author and a software company were using new special software that was faster than conventional systems.
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