3D MRI heart segmentation of mouse embryos.

Comput Biol Med

University of Sciences and Technology of Oran (USTO), Electronics Department, Oran, Algeria.

Published: January 2010

MRI has become an effective tool for anatomical mice studies. Currently, embryologists study the development of mouse embryos in order to understand the mechanisms of human development. The aim of the research presented in this paper, is to develop a semi-automatic image segmentation framework based 3D deformable models to identify cardiac malformations which are a major cause of death in children. The segmentation systems have been used to segment 3D mouse embryos heart structures. Results on the ventricles and on the heart muscle are presented and compared with manually segmented models.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.compbiomed.2009.11.001DOI Listing

Publication Analysis

Top Keywords

mouse embryos
12
mri heart
4
heart segmentation
4
segmentation mouse
4
embryos mri
4
mri effective
4
effective tool
4
tool anatomical
4
anatomical mice
4
mice studies
4

Similar Publications

Divergent destinies: insights into the molecular mechanisms underlying EPI and PE fate determination.

Life Sci Alliance

March 2025

https://ror.org/05f950310 Department of Development and Regeneration, Stem Cell Institute, KU Leuven, Leuven, Belgium

Mammalian pre-implantation development is entirely devoted to the specification of extra-embryonic lineages, which are fundamental for embryo morphogenesis and support. The second fate decision is taken just before implantation, as defined by the epiblast (EPI) and the primitive endoderm (PE) specification. Later, EPI forms the embryo proper and PE contributes to the formation of the yolk sac.

View Article and Find Full Text PDF

Signaling via retinoic acid receptors mediates decidual angiogenesis in mice and human stromal cell decidualization.

FASEB J

January 2025

Department of Obstetrics, Gynecology and Reproductive Health, Rutgers Biomedical and Health Sciences, Newark, New Jersey, USA.

At the maternal-fetal interface, tightly regulated levels of retinoic acid (RA), the physiologically active metabolite of vitamin A, are required for embryo implantation and pregnancy success. Herein, we utilize mouse models, primary human cells, and pharmacological tools to demonstrate how depletion of RA signaling via RA receptor (RAR) disrupts implantation and progression of early pregnancy. To inhibit RAR signaling during early pregnancy, BMS493, an inverse pan-RAR agonist that prevents RA-induced differentiation, was administered to pregnant mice during the peri-implantation period.

View Article and Find Full Text PDF

Cyclin-dependent kinases (CDKs) are key regulators of cell cycle progression, in conjunction with cyclins. The cyclin-CDK system is highly conserved among eukaryotes, and CDK1 is considered essential for progression through the M phase. However, the extent to which cell cycle progression depends on CDK1 varies between cell types.

View Article and Find Full Text PDF

Female infertility is a significant healthcare burden that is frequently encountered among couples globally. While environmental factors, comorbidities, and lifestyle determine reproductive health, certain genetic variants in key reproductive genes can potentially cause unsuccessful pregnancies. Such crucial proteins have been identified within the subcortical maternal complex (SCMC) and play an integral role in the early stages of embryogenesis before embryo implantation.

View Article and Find Full Text PDF

Spatiotemporal dynamics of fetal liver hematopoietic niches.

J Exp Med

February 2025

Immunology Department, Unit of Lymphocytes and Immunity, Institut Pasteur, Paris, France.

Embryonic hematopoietic cells develop in the fetal liver (FL), surrounded by diverse non-hematopoietic stromal cells. However, the spatial organization and cytokine production patterns of the stroma during FL development remain poorly understood. Here, we characterized and mapped the hematopoietic and stromal cell populations at early (E12.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!