Acrolein is an alpha,beta-unsaturated aldehyde that is a major environmental pollutant, as well as a product of cellular metabolism. DNA bases react with acrolein to form two regioisomeric exocyclic guanine adducts, namely gamma-hydroxy-propanodeoxyguanosine (gamma-OH-PdG) and its positional isomer alpha-hydroxy-propanodeoxyguanosine (alpha-OH-PdG). The gamma-OH-PdG isomer adopts a ring-opened conformation with minimal structural perturbation of the DNA host duplex. Conversely, the alpha-OH-PdG isomer assumes a ring-closed conformation that significantly disrupts Watson-Crick base-pair alignments within the immediate vicinity of the damaged site. We have employed a combination of calorimetric and spectroscopic techniques to characterize the thermodynamic origins of these lesion-induced structural alterations. Specifically, we have assessed the energetic impact of alpha-OH-PdG centered within an 11-mer duplex by hybridizing the adduct-containing oligonucleotide with its complementary strand harboring a central base N [where N = C or A], yielding a pair of duplexes containing the nascent lesion (alpha-OH-PdG.C) or mismatched adduct (alpha-OH-PdG.A), respectively. Our data reveal that the nascent lesion is highly destabilizing, whereas its mismatched counterpart partially ameliorates alpha-OH-PdG-induced destabilization. Collectively, our data provide energetic characterizations of the driving forces that modulate error-free versus error-prone DNA translesion synthesis. The biological implications of our findings are discussed in terms of energetically probing acrolein-mediated mutagenicity versus adduct-induced genotoxicity.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2891022PMC
http://dx.doi.org/10.1002/bip.21355DOI Listing

Publication Analysis

Top Keywords

nascent lesion
8
impact alpha-hydroxy-propanodeoxyguanine
4
alpha-hydroxy-propanodeoxyguanine adducts
4
dna
4
adducts dna
4
dna duplex
4
duplex energetics
4
energetics opposite
4
opposite base
4
base modulation
4

Similar Publications

Abasic sites are one of the most frequent forms of DNA damage that interfere with DNA replication. However, abasic sites exhibit complex effects because they can be processed into other types of DNA damage. Thus, it remains poorly understood how abasic sites affect replisome progression, which replication-coupled repair pathways they elicit, and whether this is affected by the template strand that is damaged.

View Article and Find Full Text PDF
Article Synopsis
  • The nasopharyngolaryngoscopy (NPL) is crucial for early detection of head and neck cancers, but misdiagnoses are still frequent due to physician limitations in visualization and identification.
  • Artificial intelligence (AI) has transformed medical imaging, particularly gastrointestinal endoscopy, improving quality control and lesion identification, yet standardized guidelines for NPL's use are lacking globally.
  • This paper reviews current uses of NPL, discusses its shortcomings, highlights AI's potential in NPL, and suggests future research directions, believing that AI's clinical application in NPL will grow rapidly soon.
View Article and Find Full Text PDF

Hypoxia is common in tumors and is associated with cancer progression and drug resistance, driven, at least in part, by genetic instability. Little is known on how hypoxia affects Translesion DNA Synthesis (TLS), in which error-prone DNA polymerases bypass lesions, thereby maintaining DNA continuity at the price of increased mutations. Here we show that under acute hypoxia, PCNA monoubiquitination, a key step in TLS, and expression of error-prone DNA polymerases increased under regulation of the HIF1α transcription factor.

View Article and Find Full Text PDF

Causes and consequences of DNA double-stranded breaks in cardiovascular disease.

Mol Cell Biochem

October 2024

Center for Cardiovascular Genetic Studies, Institute of Molecular Medicine, The University of Texas Health Science Center, 6770 Bertner Street, Suite C900A, Houston, TX, 77030, USA.

Article Synopsis
  • The genome is constantly exposed to both internal and external factors that can cause DNA damage, with an estimated 10 to 10 lesions occurring in mammalian cells daily, necessitating a balance between damage and repair to maintain stability.
  • During transcription, DNA strands unwind to allow RNA polymerase II to synthesize RNA, which creates supercoils that topoisomerases resolve by introducing double-stranded breaks (DSBs), making DSBs a normal part of gene expression despite their risks.
  • When transcription is impeded by damaged DNA or proteins, it leads to transcription stress, resulting in the risk of aberrant RNA, accumulation of DSBs, and activation of DNA damage response pathways that may trigger senescence and inflammation,
View Article and Find Full Text PDF
Article Synopsis
  • * After exposure to UV light, CS-B cells showed a delay in transcription progress and less dynamic chromatin compared to normal cells, revealing limitations in their response to DNA damage.
  • * The research highlights that despite these impairments, transcription initiation still occurs in CS-B fibroblasts shortly after UV exposure, indicating a complex role for CSB beyond its known function in DNA repair.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!