The structure of Mg-ATPase nucleotide-binding domain at 1.6 A resolution reveals a unique ATP-binding motif.

Acta Crystallogr D Biol Crystallogr

Department of Biology, August Krogh Building, University of Copenhagen, DK-2100 Copenhagen O, Denmark.

Published: November 2009

AI Article Synopsis

  • The structure of the MgtA nucleotide-binding domain from E. coli was determined with high precision (1.6 A resolution) and features a combination of a six-stranded beta-sheet and three alpha-helices.
  • The MgtA domain is more compact than the Ca-ATPase, lacking a beta-strand found in the latter, which contributes to its unique structural properties.
  • The ATP-binding site is surrounded by conserved motifs common to P-type ATPases, alongside a distinctive short motif specific to Mg-ATPases, which influences the accessibility of the binding site.

Article Abstract

The structure of the nucleotide-binding domain of the Mg-ATPase MgtA from Escherichia coli has been solved and refined to 1.6 A resolution. The structure is made up of a six-stranded beta-sheet and a bundle of three alpha-helices, with the nucleotide-binding site sandwiched in between. The MgtA nucleotide-binding domain is shorter and more compact compared with that of the related Ca-ATPase and lacks one of the beta-strands at the edge of the beta-sheet. The ATP-binding pocket is surrounded by three sequence and structural motifs known from other P-type ATPases and a fourth unique motif that is found only in Mg-ATPases. This motif consists of a short polypeptide stretch running very close to the ATP-binding site, while in Ca-ATPase the binding site is more open, with the corresponding polypeptide segment folded away from the active site.

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Source
http://dx.doi.org/10.1107/S090744490903306XDOI Listing

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