Castellaniella ginsengisoli sp. nov., a beta-glucosidase-producing bacterium.

Int J Syst Evol Microbiol

Korean Ginseng Center and Ginseng Genetic Resource Bank, Kyung Hee University, 1 Seocheon-dong, Giheung-gu Yongin-si, Gyeonggi-do 449-701, Republic of Korea.

Published: September 2009

AI Article Synopsis

  • A new Gram-negative bacterium, named DCY36T, was discovered in South Korean soil from a ginseng field and studied using various taxonomic methods.
  • Genetic analysis revealed that DCY36T is closely related to the genus Castellaniella, with 16S rRNA gene similarities to related species between 97.5% and 98.4%.
  • Based on its unique characteristics, strain DCY36T is proposed to be classified as a new species called Castellaniella ginsengisoli.

Article Abstract

A Gram-negative, motile bacterium, designated DCY36T, was isolated from soil of a ginseng field in South Korea and was characterized using a polyphasic taxonomic approach. Comparative 16S rRNA gene sequence analysis showed that strain DCY36T belongs to genus Castellaniella in the family Alcaligenaceae of the class Betaproteobacteria. The 16S rRNA gene sequence similarities between strain DCY36T and the three recognized representatives of the genus, Castellaniella caeni Ho-11T, Castellaniella defragrans 54PinT and Castellaniella denitrificans NKNTAUT, were 98.4, 97.5 and 98.1%, respectively. Strain DCY36T exhibited relatively low levels of DNA-DNA relatedness with respect to these three species. The G+C content of the genomic DNA was 63.7 mol%. Strain DCY36T contained ubiquinone Q-8. The major fatty acids were C16:0 (27.4%), C18:1omega7c (16.9%) and summed feature 4 (C16:1omega7c and C15:0 iso 2-OH, 32.5%). On the basis of phenotypic and genotypic properties and phylogenetic distinctiveness, strain DCY36T (=KCTC 22398T=JCM 15515T) should be classified in the genus Castellaniella as the type strain of a novel species, for which the name Castellaniella ginsengisoli sp. nov. is proposed.

Download full-text PDF

Source
http://dx.doi.org/10.1099/ijs.0.008300-0DOI Listing

Publication Analysis

Top Keywords

strain dcy36t
20
genus castellaniella
12
castellaniella ginsengisoli
8
ginsengisoli nov
8
16s rrna
8
rrna gene
8
gene sequence
8
castellaniella
7
dcy36t
6
strain
6

Similar Publications

Fifteen Daurian pika (Ochotona dauurica) were introduced to a zoological collection in December 2011 as founders for a planned breeding colony. Despite breeding success, the colony shrunk over 37 mo to 11 animals. Mortality in 11 of 46 deceased animals, including wild-caught "founders" and captive-born offspring, was associated with a suppurative inflammation and abscess formation of the spleen, skin, peripheral and internal lymph nodes, liver, lungs, kidney, or a combination of organs.

View Article and Find Full Text PDF

Castellaniella hirudinis sp. nov., isolated from the skin of Hirudo verbana.

Int J Syst Evol Microbiol

February 2013

Institut für Angewandte Mikrobiologie, Justus-Liebig-Universität Giessen, D-35392 Giessen, Germany.

A Gram-staining-negative, rod-shaped, non-spore-forming bacterium, designated strain E103(T), was isolated from the skin of the medical leech Hirudo verbana. 16S rRNA gene sequence analysis showed that the isolate was closely related to species of the genus Castellaniella. Castellaniella ginsengisoli DCY36(T) was shown to be the most closely related (98.

View Article and Find Full Text PDF

Castellaniella daejeonensis sp. nov., isolated from soil.

Int J Syst Evol Microbiol

September 2010

Department of Biology and Medicinal Science, Pai Chai University, 14 Yeon-Ja 1 Gil, Seo-Gu, Daejeon 302-735, Republic of Korea.

A Gram-negative, non-spore-forming, motile, facultatively anaerobic bacterium, designated strain MJ06(T), was isolated from oil-contaminated soil and was characterized taxonomically by using a polyphasic approach. Strain MJ06(T) contained ubiquinone Q-8 as the major respiratory lipoquinone, putrescine as the predominant polyamine and phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol as major polar lipids. The G+C content of the genomic DNA of strain MJ06(T) was 66.

View Article and Find Full Text PDF

Castellaniella ginsengisoli sp. nov., a beta-glucosidase-producing bacterium.

Int J Syst Evol Microbiol

September 2009

Korean Ginseng Center and Ginseng Genetic Resource Bank, Kyung Hee University, 1 Seocheon-dong, Giheung-gu Yongin-si, Gyeonggi-do 449-701, Republic of Korea.

Article Synopsis
  • A new Gram-negative bacterium, named DCY36T, was discovered in South Korean soil from a ginseng field and studied using various taxonomic methods.
  • Genetic analysis revealed that DCY36T is closely related to the genus Castellaniella, with 16S rRNA gene similarities to related species between 97.5% and 98.4%.
  • Based on its unique characteristics, strain DCY36T is proposed to be classified as a new species called Castellaniella ginsengisoli.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!