The nucleophilic substitution reactions of Y-O-aryl methyl phosphonochloridothioates with substituted anilines (XC(6)H(4)NH(2)) and deuterated anilines (XC(6)H(4)ND(2)) are investigated kinetically in acetonitrile at 55.0 degrees C. The Hammett and Brønsted plots for substituent (X) variations in the nucleophiles are biphasic concave downwards with a break region between X = H and 4-Cl. The deuterium kinetic isotope effects (DKIEs) are primary normal (k(H)/k(D) = 1.03-1.30) for stronger nucleophiles (X = 4-MeO, 4-Me and H), and extremely large secondary inverse (k(H)/k(D) = 0.367-0.567) for weaker nucleophiles (X = 4-Cl, 3-Cl and 3-NO(2)). The cross-interaction constants are negative (rho(XY(H)) = -0.95 and rho(XY(D)) = -1.11) for stronger nucleophiles, while positive (rho(XY(H)) = +0.77 and rho(XY(D)) = +0.21) for weaker nucleophiles. These kinetic results indicate that the mechanism changes from a concerted process involving frontside nucleophilic attack for stronger nucleophiles to a stepwise process with a rate-limiting leaving group expulsion from the intermediate involving backside attack for weaker nucleophiles. A hydrogen-bonded, four-center-type transition state (TS) is suggested for a frontside attack, while a trigonal bipyramidal pentacoordinate TS is suggested for a backside attack. The unusually small DKIEs, as small as or equal to 0.4, for weaker nucleophiles seem to be ascribed to severe steric congestion in the TS.
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Adv Mater
December 2024
Beijing Institute of Nanoenergy and Nanosystems, Chinese Academy of Sciences, Beijing, 101400, China.
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November 2024
State Key Laboratory of Chem/Bio-Sensing and Chemometrics, Joint International Research Laboratory of Energy Electrochemistry, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, China.
The strong basicity of fluoride ions leads to detrimental nucleophilic attack on organic components in the electrolytes, such as β-hydrogen elimination reactions with organic cations and solvents, converting "naked" F into corrosive and unstable bifluoride (HF ) ions. These reactions significantly constrain the choice of suitable solvents and salts to develop electro(chemical) stable fluoride ion electrolytes. In this work, we replaced the triple water ligands typically present in industrial organic fluoride salts with dual 1,3-diphenylurea (DPU) coordination via hydrogen bonding interaction.
View Article and Find Full Text PDFEMBO J
December 2024
Research Group Membrane Protein Biochemistry, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077, Göttingen, Germany.
Ubiquitin-conjugating enzymes (E2) play a crucial role in the attachment of ubiquitin to proteins. Together with ubiquitin ligases (E3), they catalyze the transfer of ubiquitin (Ub) onto lysines with high chemoselectivity. A subfamily of E2s, including yeast Ubc6 and human Ube2J2, also mediates noncanonical modification of serines, but the structural determinants for this chemical versatility remain unknown.
View Article and Find Full Text PDFOrg Biomol Chem
October 2024
Gause Institute of New Antibiotics, 11 B. Pirogovskaya Street, Moscow, 119021, Russian Federation.
Heterocyclic derivatives of anthraquinone demonstrated a high potential for the development of new antitumor compounds. In this study, we report a scheme for the synthesis of thiazole-fused anthraquinones and the results of their antiproliferative activity. A convenient metal-free method for the thiolation of anthraquinone derivatives has been proposed for the preparation of the key intermediates.
View Article and Find Full Text PDFChemphyschem
December 2024
College of Engineering, Peking University, Beijing, 10087, China.
The study investigated the impact of protonation and hydration on the geometry of nitroxide radicals using B3LYP and M06-2X methods. Results indicated that TEMPO exhibited the highest proton affinity in comparison to TEMPOL and TEMPONE. Two pathways contribute to hydrated protonated molecules.
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