Novel dynamic molecular tweezers (DMTs) 3 a, 3 b, 4 a, 4 b, and 5 b, composed of two tub-shaped dibenzocyclooctatetraene (DBCOT) units, were designed and synthesized. The cyclooctatetraene (COT) rings of these DMTs readily invert in solution, and the molecular structure shows rigid syn and anti forms in an equilibrium mixture in solution. The syn and anti conformers can be observed by NMR. The isomerization barriers of 3 a, 3 b, 4 a, 4 b, and 5 b are in the range of 16.5-21.3 kcal mol(-1), depending on steric repulsion between substituents of the COT rings and protons of the central benzene ring. These DMTs form complexes with 2,3-dichloro-5,6-dicyano-1,4-benzoquinone (DDQ) and 1,2,4,5-tetracyano-benzene (TCNB) in solution and in the solid state. The binding abilities of these DMTs increase with electron-donating substituents on COT, which increase the electron densities of the cavity of the syn form, as supported by theoretical calculations. In addition, elongation of the terminal alkoxy chains of the DMTs was found to cause the enhancement of van der Waals contact with guest molecules. Therefore, 5 b, which has CH(2)OMe groups on the COT rings and longer ethoxy groups on the terminal benzene rings, showed the highest electron density of the cavity and hence the highest binding ability with the electron-deficient guest molecules. Interestingly, solutions of 3 b, 4 b, and 5 b show thermochromism in the presence of DDQ. A solution of 3 b or 4 b with DDQ in CHCl(3) is green due to charge-transfer interaction at room temperature and the color changes from green to yellow upon heating to 60 degrees C and from green to blue upon cooling to -40 degrees C, whereas the high complexation ability of 5 b with DDQ only shows a change in the shade of blue.
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http://dx.doi.org/10.1002/chem.200900623 | DOI Listing |
Chem Commun (Camb)
January 2025
Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
An isostructural series of four annulated actinocene complexes, M(hdcCOT) (M = Th, U, Np, Pu), is reported. The syntheses proceed through a trivalent starting material when M = U, Np, Pu with subsequent oxidation or, in the case of M = Th, directly from ThCl(DME). X-ray crystallography shows that each actinocene has molecular point symmetry in the solid state, with the metal atoms symmetrically bonded to two 10π-aromatic [8]annulene dianion rings.
View Article and Find Full Text PDFChem Sci
December 2024
Department of Chemistry, University of California Berkeley California 94720 USA
Conjugated ladder polymers (CLPs) are difficult yet captivating synthetic targets due to their fully unsaturated fused backbones. Inherent challenges associated with their synthesis often lead to low yields, structural defects, and insoluble products. Here a new method to form CLPs is demonstrated, utilizing a high-yielding dimerization of annulated zirconacyclopentadienes to form cyclooctatetraene (COT) monomer units.
View Article and Find Full Text PDFJ Phys Chem Lett
July 2024
Department of Chemistry, School of Science, Tokyo Institute of Technology, 2-12-1 4259 Ookayama, Meguro-ku, Tokyo 152855, Japan.
The gas phase protonation sites of six naturally occurring nicotinoids, namely nicotine (NIC), nornicotine (NOR), anabasine (ANB), anatabine (ANT), cotinine (COT), and myosmine (MYO), consisting of a common Pyridine and differing -Pyridine rings, have been determined for the first time at the physiological temperature from cryogenic ion trap infrared spectroscopy and electronic structure calculations. The protonation site on either of these two rings is related to the nicotinoid's biological activity. At room temperature, NIC is a mixture of Pyridine and Pyrrolidine (-Pyridine) protomers, whereas NOR, ANB, ANT, and COT are pure Pyridine protomers and finally MYO is mostly a Pyroline (-Pyridine) protomer.
View Article and Find Full Text PDFInorg Chem
May 2024
Department of Chemistry, Michigan State University, 578 South Shaw Lane, East Lansing, Michigan 48824, United States.
Judicious design of ligand scaffolds to highly anisotropic lanthanide ions led to substantial advances in molecular spintronics and single-molecule magnetism. Erbium-based single-molecule magnets (SMMs) are rare, which is attributed to the prolate-shaped Er ion requiring an equatorial ligand field for enhancing its single-ion magnetic anisotropy. Here, we present an electron-rich mononuclear Er SMM, [K(crypt-222)][Er(dbCOT)], (where dbCOT = dibenzocyclooctatetraene), that was obtained from a salt metathesis reaction of ErCl and KdbCOT.
View Article and Find Full Text PDFJ Phys Chem B
May 2024
Department of Chemistry, University of Washington, Seattle, Washington 98195, United States.
The binding affinity of nicotinoids to the binding residues of the αβ variant of the nicotinic acetylcholine receptor (nAChR) was identified as a strong predictor of the nicotinoid's addictive character. Using ab initio calculations for model binding pockets of increasing size composed of 3, 6, and 14 amino acids (3AA, 6AA, and 14AA) that are derived from the crystal structure, the differences in binding affinity of 6 nicotinoids, namely, nicotine (NIC), nornicotine (NOR), anabasine (ANB), anatabine (ANT), myosmine (MYO), and cotinine (COT) were correlated to their previously reported doses required for increases in intracranial self-stimulation (ICSS) thresholds, a metric for their addictive function. By employing the many-body decomposition, the differences in the binding affinities of the various nicotinoids could be attributed mainly to the proton exchange energy between the pyridine and non-pyridine rings of the nicotinoids and the interactions between them and a handful of proximal amino acids, namely Trp156, Trpβ57, Tyr100, and Tyr204.
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