Monte Carlo simulation for statistical mechanics model of ion-channel cooperativity in cell membranes.

Phys Rev E Stat Nonlin Soft Matter Phys

Department of Physics, Gaziosmanpaşa University, 60250 Tokat, Turkey.

Published: March 2009

Voltage-gated ion channels are key molecules for the generation and propagation of electrical signals in excitable cell membranes. The voltage-dependent switching of these channels between conducting and nonconducting states is a major factor in controlling the transmembrane voltage. In this study, a statistical mechanics model of these molecules has been discussed on the basis of a two-dimensional spin model. A new Hamiltonian and a new Monte Carlo simulation algorithm are introduced to simulate such a model. It was shown that the results well match the experimental data obtained from batrachotoxin-modified sodium channels in the squid giant axon using the cut-open axon technique.

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http://dx.doi.org/10.1103/PhysRevE.79.031919DOI Listing

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