Complexation of methyl-glycine-amide functionalized thiacalix[4]arene with K(+) and Ag(+) has been studied using density functional theory (DFT) in the gas phase. To account for the conformational possibilities of the ligand, the free ligand and its potassium complexes were subjected to global minima searches on the molecular mechanics (MM) level of theory with the OPLS (optimized potentials for liquid simulations) force field. For the free ligand, the order of the energies and geometries of the ligand conformers is in agreement between MM and DFT; however, the position of K(+) in the ligand's cavity was predicted differently by these methods. Hydrogen bonding of amide hydrogens in the ligands' podand arms was found to take place predominantly with the ether oxygens of the same arm rather than the other arms' carbonyls. According to DFT calculations, the silver cation preferred to coordinate with one sulfur bridge and three carbonyl groups, whereas potassium cation favored interaction with the four carbonyl oxygens of the podand amide arms. Neither cation preferred the N-mode of coordination. For all obtained conformers, intramolecular hydrogen bonds disfavor complexation, increasing the preorganizational energy to be paid.
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Polymers (Basel)
January 2025
Postgraduate Program in Engineering of Processes and Technologies (PGEPROTEC), University of Caxias do Sul (UCS), Caxias do Sul 95070-560, Brazil.
Technical lignins are globally available and a sustainable feedstock. The unique properties of technical lignins suggest that these materials should have several industrial applications. The main proposal of this study is to evaluate the relationship between the structure and properties of two technical lignins.
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January 2025
Instituto Andaluz de Ciencias de la Tierra (IACT-CSIC), Consejo Superior de Investigaciones Científicas, Av. de las Palmeras 4, 18100 Armilla, Granada, Spain.
Many properties of 2,4-dichlorophenoxyacetic acid (2,4-D) depend on its molecular environment, such as whether it is an isolated molecule, a dimer, or in a crystalline state. The molecular geometry, conformational analysis, and vibrational spectrum of 2,4-D were theoretically calculated using Density Functional Theory (DFT) methods. A new slightly more stable conformer was found, which is different to those previously reported.
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January 2025
Preclinical Department, Faculty of Medicine & Defence Health, Universiti Pertahanan Nasional Malaysia, Kuala Lumpur 57000, Malaysia.
2-phenylchromen-4-one, commonly known as flavone, plays multifaceted roles in biological response that can be abundantly present in natural sources. The methoxy group in naturally occurring flavones promotes cytotoxic activity in various cancer cell lines by targeting protein markers, in facilitating ligand-protein binding mechanisms and activating cascading downstream signaling pathways leading to cell death. However, the lipophilic nature of these analogs is a key concern as it impacts drug membrane transfer.
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January 2025
N. S. Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, Leninsky Prosp. 31, 119991 Moscow, Russia.
The interaction of sodium phytate hydrate CHOP·xNa·yHO (phytNa) with Cu(OAc)·HO and 1,10-phenanthroline (phen) led to the anionic tetranuclear complex [Cu(HO)(phen)(phyt)]·2Na·2NH·32HO (), the structure of the latter was determined by X-ray diffraction analysis. The phytate is completely deprotonated; six phosphate fragments (with atoms P1-P6) are characterized by different spatial arrangements relative to the cyclohexane ring (1a5e conformation), which determines two different types of coordination to the complexing agents-P1 and P3, P4, and P6 have monodentate, while P2 and P5 are bidentately bound to Cu cations. The molecular structure of the anion complex is stabilized by a set of strong intramolecular hydrogen bonds involving coordinated water molecules.
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January 2025
Faculty of Chemistry, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland.
γ- and δ-lactones were formed by bromine oxidation of commercially available D-lyxose, as confirmed by IR analysis. The former was isolated, and its structure was confirmed by NMR spectra and X-ray analysis. In this structure, the presence of both intermolecular and intramolecular hydrogen bonds was found.
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