The frequency distribution of species abundances [the species abundance distribution (SAD)] is considered to be a fundamental characteristic of community structure. It is almost invariably strongly right-skewed, with most species being rare. There has been much debate as to its exact properties and the processes from which it results. Here, we contend that an SAD for a study plot must be viewed as spliced from the SADs of many smaller nonoverlapping subplots covering that plot. We show that this splicing, if applied repeatedly to produce subplots of progressively larger size, leads to the observed shape of the SAD for the whole plot regardless of that of the SADs of those subplots. The widely reported shape of an SAD is thus likely to be driven by a spatial parallel of the central limit theorem, a statistically convergent process through which the SAD arises from small to large scales. Exact properties of the SAD are driven by species spatial turnover and the spatial autocorrelation of abundances, and can be predicted using this information. The theory therefore provides a direct link between SADs and the spatial correlation structure of species distributions, and thus between several fundamental descriptors of community structure. Moreover, the statistical process described may lie behind similar frequency distributions observed in many other scientific fields.
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http://dx.doi.org/10.1073/pnas.0810096106 | DOI Listing |
Microbiome
January 2025
Key Laboratory for Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan, China.
Background: The microbes residing in ruminant gastrointestinal tracts play a crucial role in converting plant biomass to volatile fatty acids, which serve as the primary energy source for ruminants. This gastrointestinal tract comprises a foregut (rumen) and hindgut (cecum and colon), which differ in structures and functions, particularly with respect to feed digestion and fermentation. While the rumen microbiome has been extensively studied, the cecal microbiome remains much less investigated and understood, especially concerning the assembling microbial communities and overriding pathways of hydrogen metabolism.
View Article and Find Full Text PDFOne Health Outlook
January 2025
Medical Virology Unit, Faculty of Basic Medical and Applied Sciences, Lead City University and Primary Health Care Board, Ibadan, Oyo State, Nigeria.
Background: Dengue fever (DF) poses a growing global threat, necessitating a comprehensive one-health approach to address its complex interplay between human, animal, and environmental factors. In Oyo State, Nigeria, the true burden of DF remains unknown due to underdiagnosis and misdiagnosis as malaria, exacerbated by poor health-seeking behavior, weak surveillance systems, and inadequate health infrastructure. Adopting a one-health approach is crucial to understanding the dynamics of DF transmission.
View Article and Find Full Text PDFNutr J
January 2025
Department of Infectious Diseases, National Clinical Research Center for Infectious Diseases, the Third People's Hospital of Shenzhen, 29 Bulan Road, Shenzhen, Guangdong, 518000, China.
Background: Previous studies found that it is promising to achieve the protective effects of dietary patterns on cardiovascular health through the modulation of gut microbiota. However, conflicting findings have been reported on how dietary patterns impact gut microbiota in individuals either established or at risk of cardiovascular disease (CVD). Our systematic review aimed to explore the effect of dietary patterns on gut microbiota composition and on risk factors for CVD in these populations.
View Article and Find Full Text PDFSci Rep
January 2025
Animal Genomics Laboratory, Animal Biotechnology Division, ICAR-National Dairy Research Institute, Karnal, Haryana, India.
Poor male fertility significantly affects dairy production, primarily due to low conception rates (CR) in bulls, even when cows are inseminated with morphologically normal sperm. Seminal plasma is a key factor in evaluating the fertilizing ability of bull semen. The extracellular vesicles (EVs) in seminal plasma contain fertility-associated proteins like SPAM1, ADAM7, and SP10, which influence sperm function and fertilizing potential.
View Article and Find Full Text PDFNat Commun
January 2025
Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, College Park, MD, USA.
Inflammation-associated perturbations of the gut microbiome are well characterized, but poorly understood. Here, we demonstrate that disparate taxa recapitulate the metabolism of the oxidized sugars glucarate and galactarate, utilizing enzymatically divergent, yet functionally equivalent, gud/gar pathways. The divergent pathway in commensals includes a putative 5-KDG aldolase (GudL) and an uncharacterized ABC transporter (GarABC) that recapitulate the function of their non-homologous counterparts in pathogens.
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