In this paper, we present two related multigrid algorithms for multiphase image segmentation. Algorithm I solves the model by Vese-Chan. We first generalize our recently developed multigrid method to this multiphase segmentation model (MG1); we also give a local Fourier analysis for the local smoother which leads to a new and more effective smoother. Although MG1 is found many magnitudes faster than the fast method of additive operator splitting (AOS), both algorithms are not robust with regard to the initial guess. To overcome this dependence on the initial guess, we consider a hierarchical segmentation model which achieves multiphase segmentation by repeated use of the Chan-Vese two-phase model; our Algorithm II solves this model by a multigrid algorithm (MG2). Numerical experiments show that both algorithms are efficient and in particular MG2 is more robust than MG1 with respect to initial guesses. AMS subject classifications: 68U10, 65F10, 65K10.
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http://dx.doi.org/10.1109/TIP.2009.2014260 | DOI Listing |
Neural Netw
December 2024
Department of Earth Science and Engineering, Imperial College London, Prince Consort Road, London SW7 2BP, UK; Centre for AI-Physics Modelling, Imperial-X, White City Campus, Imperial College London, W12 7SL, UK.
Machine learning (ML) has benefited from both software and hardware advancements, leading to increasing interest in capitalising on ML throughout academia and industry. There have been efforts in the scientific computing community to leverage this development via implementing conventional partial differential equation (PDE) solvers with machine learning packages, most of which rely on structured spatial discretisation and fast convolution algorithms. However, unstructured meshes are favoured in problems with complex geometries.
View Article and Find Full Text PDFBull Math Biol
November 2024
Zuse Institute Berlin (ZIB), Takustrasse 7, 14195, Berlin, Germany.
The multi-grid reaction-diffusion master equation (mgRDME) provides a generalization of stochastic compartment-based reaction-diffusion modelling described by the standard reaction-diffusion master equation (RDME). By enabling different resolutions on lattices for biochemical species with different diffusion constants, the mgRDME approach improves both accuracy and efficiency of compartment-based reaction-diffusion simulations. The mgRDME framework is examined through its application to morphogen gradient formation in stochastic reaction-diffusion scenarios, using both an analytically tractable first-order reaction network and a model with a second-order reaction.
View Article and Find Full Text PDFInt J Numer Method Biomed Eng
November 2024
Institute of Structural Analysis, Graz University of Technology, Graz, Austria.
The article presents a semi-automatic approach to generating structured hexahedral meshes of patient-specific aortas ailed by aortic dissection. The condition manifests itself as a formation of two blood flow channels in the aorta, as a result of a tear in the inner layers of the aortic wall. Subsequently, the morphology of the aorta is greatly impacted, making the task of domain discretization highly challenging.
View Article and Find Full Text PDFJ Phys Chem A
September 2024
Department of Chemistry, University of Colorado, Boulder, Colorado 80302, United States.
In this article, we present an interpolative separable density fitting (ISDF)-based algorithm to calculate the exact exchange in periodic mean field calculations. In the past, decomposing the two-electron integrals into the tensor hypercontraction (THC) form using ISDF was the most expensive step of the entire mean field calculation. Here, we show that by using a multigrid-ISDF algorithm, both the memory and the CPU cost of this step can be reduced.
View Article and Find Full Text PDFComput Biol Med
March 2024
Institute for Medical Engineering, Otto-von-Guericke University, Magdeburg, Germany; Forschungscampus STIMULATE, Otto-von-Guericke University, Magdeburg, Germany.
Traditional navigational bronchoscopy procedures rely on preprocedural computed tomography (CT) and intraoperative chest radiography and cone-beam CT (CBCT) to biopsy peripheral lung lesions. This navigational approach is challenging due to the projective nature of radiography, and the high radiation dose, long imaging time, and large footprints of CBCT. Digital tomosynthesis (DTS) is considered an attractive alternative combining the advantages of radiography and CBCT.
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