Structure of the human RECQ1 helicase reveals a putative strand-separation pin.

Proc Natl Acad Sci U S A

Structural Genomics Consortium, Old Road Campus Research Building, Roosevelt Drive, University of Oxford, Oxford OX3 7DQ, United Kingdom.

Published: January 2009

RecQ-like helicases, which include 5 members in the human genome, are important in maintaining genome integrity. We present a crystal structure of a truncated form of the human RECQ1 protein with Mg-ADP. The truncated protein is active in DNA fork unwinding but lacks other activities of the full-length enzyme: disruption of Holliday junctions and DNA strand annealing. The structure of human RECQ1 resembles that of Escherichia coli RecQ, with some important differences. All structural domains are conserved, including the 2 RecA-like domains and the RecQ-specific zinc-binding and winged-helix (WH) domains. However, the WH domain is positioned at a different orientation from that of the E. coli enzyme. We identify a prominent beta-hairpin of the WH domain as essential for DNA strand separation, which may be analogous to DNA strand-separation features of other DNA helicases. This hairpin is significantly shorter in the E. coli enzyme and is not required for its helicase activity, suggesting that there are significant differences between the modes of action of RecQ family members.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2628305PMC
http://dx.doi.org/10.1073/pnas.0806908106DOI Listing

Publication Analysis

Top Keywords

human recq1
12
structure human
8
dna strand
8
coli enzyme
8
dna
5
recq1 helicase
4
helicase reveals
4
reveals putative
4
putative strand-separation
4
strand-separation pin
4

Similar Publications

Beyond Nucleotide Excision Repair: The Importance of XPF in Base Excision Repair and Its Impact on Cancer, Inflammation, and Aging.

Int J Mol Sci

December 2024

Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC 20057, USA.

DNA repair involves various intricate pathways that work together to maintain genome integrity. XPF (ERCC4) is a structural endonuclease that forms a heterodimer with ERCC1 that is critical in both single-strand break repair (SSBR) and double-strand break repair (DSBR). Although the mechanistic function of ERCC1/XPF has been established in nucleotide excision repair (NER), its role in long-patch base excision repair (BER) has recently been discovered through the 5'-Gap pathway.

View Article and Find Full Text PDF

G-quadruplexes of KSHV oriLyt play important roles in promoting lytic DNA replication.

Microbiol Spectr

December 2023

Department of Microbiology and Immunology, University of Nevada, Reno School of Medicine, Reno, Nevada, USA.

Biological processes originating from the DNA and RNA can be regulated by the secondary structures present in the stretch of nucleic acids, and the G-quadruplexes are shown to regulate transcription, translation, and replication. In this study, we identified the presence of multiple G-quadruplex sites in the region (oriLyt) of Kaposi's sarcoma-associated herpesvirus (KSHV) DNA, which is essential for DNA replication during the lytic cycle. We demonstrated the roles of these G-quadruplexes through multiple biochemical and biophysical assays in controlling replication and efficient virus production.

View Article and Find Full Text PDF

Base Excision Repair: Mechanisms and Impact in Biology, Disease, and Medicine.

Int J Mol Sci

September 2023

Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC 20057, USA.

Base excision repair (BER) corrects forms of oxidative, deamination, alkylation, and abasic single-base damage that appear to have minimal effects on the helix. Since its discovery in 1974, the field has grown in several facets: mechanisms, biology and physiology, understanding deficiencies and human disease, and using BER genes as potential inhibitory targets to develop therapeutics. Within its segregation of short nucleotide (SN-) and long patch (LP-), there are currently six known global mechanisms, with emerging work in transcription- and replication-associated BER.

View Article and Find Full Text PDF

RecQ dysfunction contributes to social and depressive-like behavior and affects aldolase activity in mice.

Neurobiol Dis

May 2023

DNA Repair Section, National Institute on Aging, Baltimore, MD 21224, USA; Danish Center for Healthy Aging, University of Copenhagen, Copenhagen 2200, Denmark. Electronic address:

Article Synopsis
  • RecQ helicases are crucial for maintaining DNA stability and are linked to various diseases when dysfunctional, such as cancer and neurodegeneration.
  • This study examined the effects of ionizing radiation (IR) on mice lacking specific RecQ proteins (RecQ1, WRN, and RecQ4), revealing abnormal behavior patterns, including social and depressive-like issues.
  • Transcriptomic and metabolomic analyses indicated significant changes in neurological pathways and increased DNA damage responses in these mice, highlighting potential therapeutic targets like the Aldob and Nox4 genes.
View Article and Find Full Text PDF

Transcriptional regulation by a RecQ helicase.

Methods Enzymol

August 2022

Department of Biochemistry and Molecular Biology, College of Medicine, Howard University, Washington, DC, United States; National Human Genome Center, College of Medicine, Howard University, Washington, DC, United States. Electronic address:

RecQ helicases participate in a variety of DNA metabolic processes through their multiple biochemical activities. In vitro characterization and cellular studies have suggested that RECQ1 (also known as RECQL or RECQL1) performs its diverse functions through specific interactions with DNA and protein partners. We have taken an unbiased approach to determine the contribution of RECQ1 in genome maintenance and as a putative susceptibility factor in breast cancer.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!