Objectives: To develop and apply the polymerase chain reaction with confronting two-pair primers (PCR-CTPP) for detection and identification of hemoglobin E (Hb E).
Material And Method: Fifty unrelated northern Thais were included in the present study. DNA was extracted from peripheral blood mononuclear cells and targeted to amplify by PCR-CTPP. The amplified product was analyzed and compared with the reference hemoglobin electrophoresis and polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis.
Results: The results validated a completely concordant among these three methods consisting of 74%, 24%, and 2% identified as normal, heterozygous, and homozygous Hb E type, respectively.
Conclusion: Successful Hb E genotyping by PCR-CTPP was introduced. It allows for confirming and simultaneously detection with other thalassemia mutations.
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Health Sci Rep
April 2024
Department of Oral and Maxillofacial Medicine, School of Dentistry Kermanshah University of Medical Sciences Kermanshah Iran.
Background And Aims: Oral lichen planus (OLP) is an inflammatory mucocutaneous disorder with an immune-mediated pathogenesis. The tumor necrosis factor-α (TNF-α) level in the serum of OLP patients is significantly higher than in the control group. TNF-α-857 C/T polymorphism can be related to the increased TNF-α level in blood circulation.
View Article and Find Full Text PDFMedicina (Kaunas)
August 2023
Institute of Medical and Clinical Biochemistry, Faculty of Medicine, University of Belgrade, 11000 Belgrade, Serbia.
Current data suggest that aristolochic acid (AA) exposure is a putative cause of Balkan endemic nephropathy (BEN), a chronic kidney disease strongly associated with upper tract urothelial carcinoma. The cellular metabolism of AA is associated with the production of reactive oxygen species, resulting in oxidative distress. Therefore, the aim of this study was to analyze individual, combined and cumulative effect of antioxidant gene polymorphisms ( rs6721961, rs1048290, rs1695, rs1138272, rs8177412 and rs1045642), as well as haplotypes with the risk for BEN development and associated urothelial cell carcinoma in 209 BEN patients and 140 controls from endemic areas.
View Article and Find Full Text PDFCell J
December 2022
Department of Urology, Babol University of Medical Sciences, Babol, Iran.
Objective: Expression of CD44 variant 6 (CD44v6) as a homing-associated cell adhesion molecule (HCAM), has proved to change most cancer cells. Aim of the study is the effect of mutant allele of CD44 (rs8193C>T) and Pum2 regulatory element as a prognosis factor of prostate neoplasms: a case-control and in silico studies in the Mazandaran province-Iran.
Materials And Methods: In a case-control study, CD44-rs8193C>T genotyping of the 420 prostate neoplasms (210 benign prostatic hyperplasia (BPH) patients and 210 prostate cancer patients) and 150 healthy samples are performed by the touchdown polymerase chain reaction with confronting two-pair primers (PCR-CTPP) method.
Medicina (Kaunas)
October 2022
Faculty of Medicine, University of Belgrade, 11000 Belgrade, Serbia.
World J Gastroenterol
January 2022
Department of Bioinformatics, Africa city of technology, Khartoum 11111, Sudan.
Background: () is a ubiquitous bacterium that affects nearly half of the world's population with a high morbidity and mortality rate. Polymorphisms within the tumor necrosis factor-alpha () promoter region are considered a possible genetic basis for this disease.
Aim: To functionally characterize the genetic variations in the 5'-region (-584 to +107) of Sudanese patients infected with using in silico tools.
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