Variants of the arachidonate 5-lipoxygenase-activating protein (ALOX5AP) gene have been implicated as a risk factor for stroke. However, genetic association studies that have examined the association between ALOX5AP gene variants (HapA haplotype, HapB haplotype, and SG polymorphisms) and stroke have produced conflicting results. Therefore, the authors performed a meta-analysis of all studies with ALOX5AP genotyping (5,194 stroke cases and 4,566 controls). The meta-analysis showed significant heterogeneity among studies (P(Q) = 0.03, I(2) = 63%) and a nonsignificant association between the HapA haplotype (SG13S25G-SG13S114T-SG13S89G-SG13S32A) and stroke risk (random-effects (RE) odds ratio (OR) = 1.13, 95% confidence interval (CI): 0.88, 1.45). Regarding the HapB haplotype (SG13S377A-SG13S114A-SG13S41A-SG13S35G), there was no association with stroke risk (RE OR = 1.03, 95% CI: 0.77, 1.37). The SG13S114, SG13S89, SG13S25, SG13S32, SG13S35, and SG13S42 polymorphisms were not associated with stroke. The SG13S106 and SG13S377 polymorphisms revealed evidence of marginal association (RE OR = 1.23 (95% CI: 1.03, 1.46) and RE OR = 1.25 (95% CI: 1.04, 1.50), respectively). However, cumulative meta-analysis for the HapA haplotype showed a downward trend of odds ratios over time, and recursive cumulative meta-analysis indicated insufficient evidence for claiming or denying an association. Tests for bias revealed no evidence of biases. Rigorous genetic association studies investigating gene-gene-environment interactions may generate more conclusive claims about the genetics of stroke.

Download full-text PDF

Source
http://dx.doi.org/10.1093/aje/kwn368DOI Listing

Publication Analysis

Top Keywords

alox5ap gene
12
hapa haplotype
12
variants arachidonate
8
arachidonate 5-lipoxygenase-activating
8
5-lipoxygenase-activating protein
8
protein alox5ap
8
stroke
8
association
8
genetic association
8
association studies
8

Similar Publications

Background: The global prevalence of non-alcoholic fatty liver disease (NAFLD) is approximately 30%, and the condition can progress to non-alcoholic steatohepatitis, cirrhosis, and hepatocellular carcinoma. Metabolic and bariatric surgery (MBS) has been shown to be effective in treating obesity and related disorders, including NAFLD.

Objective: In this study, comprehensive machine learning was used to identify biomarkers for precise treatment of NAFLD from the perspective of MBS.

View Article and Find Full Text PDF

Identifying and as two hub genes in aortic dissection and function analysis by integrating RNA sequencing and single-cell RNA sequencing data.

Front Cardiovasc Med

October 2024

Department of Physiology and Pathophysiology, State Key Laboratory of Vascular Homeostasis and Remodeling, Peking University School of Basic Medical Sciences, Beijing, China.

Article Synopsis
  • The study investigates the mechanisms behind aortic dissection (AD) by analyzing public RNA sequencing datasets to identify key hub genes that could aid in diagnosis and treatment.
  • Researchers used multiple analytical methods to screen for overlapping genes and created a protein-protein interaction network, ultimately identifying five top hub genes linked to AD.
  • Further examination revealed specific hub genes upregulated in certain cell types associated with AD, suggesting they play roles in inflammation, glycolysis, tissue remodeling, and angiogenesis.
View Article and Find Full Text PDF
Article Synopsis
  • This study uses bioinformatics to identify genes that are commonly upregulated in both chemical burns and gastric cancer.
  • The researchers analyzed gene sets from the Gene Expression Omnibus (GEO) and used various tools to find shared genes and visualize their interactions.
  • Two key genes, ALOX5AP and SERPINB2, were identified as linked to both conditions, and five potential drugs were suggested for treating gastric cancer after chemical burns.
View Article and Find Full Text PDF

Background: Treatment of gliomas, the most prevalent primary malignant neoplasm of the central nervous system, is challenging. Arachidonate 5-lipoxygenase activating protein (ALOX5AP) is crucial for converting arachidonic acid into leukotrienes and is associated with poor prognosis in multiple cancers. Nevertheless, its relationship with the prognosis and the immune microenvironment of gliomas remains incompletely understood.

View Article and Find Full Text PDF
Article Synopsis
  • Bipolar disorder is a serious mental health issue, and researchers want to find out which genes might make someone more likely to get it.
  • This study used a special method (called TWAS) to analyze genetic data and found 362 genes related to bipolar disorder, with 18 being very significant.
  • They discovered important pathways and functions in cells that could help understand how bipolar disorder works and how to treat it better.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!