A flashing ratchet transports diffusive particles using a time-dependent, asymmetric potential. The particle speed is predicted to increase when a feedback algorithm based on the particle position is used. We have experimentally realized such a feedback ratchet using an optical line trap, and observed that use of feedback increases velocity by up to an order of magnitude. We compare two different feedback algorithms for small particle numbers, and find good agreement with simulations. We also find that existing algorithms can be improved to be more tolerant to feedback delay times.
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http://dx.doi.org/10.1103/PhysRevLett.101.220601 | DOI Listing |
Phys Rev E
September 2023
Departamento Estructura de la Materia, Física Térmica y Electrónica, Universidad Complutense de Madrid, Plaza de Ciencias, 1, 28040 Madrid, Spain.
Feedback control uses the state information of the system to actuate on it. The information used implies an effective entropy reduction of the controlled system, potentially increasing its performance. How to compute this entropy reduction has been formally shown for a general system and has been explicitly computed for spatially discrete systems.
View Article and Find Full Text PDFNature
January 2023
Department of Chemistry, Northwestern University, Evanston, IL, USA.
Macroscopic electric motors continue to have a large impact on almost every aspect of modern society. Consequently, the effort towards developing molecular motors that can be driven by electricity could not be more timely. Here we describe an electric molecular motor based on a [3]catenane, in which two cyclobis(paraquat-p-phenylene) (CBPQT) rings are powered by electricity in solution to circumrotate unidirectionally around a 50-membered loop.
View Article and Find Full Text PDFLangmuir
October 2022
Graduate School of Materials Science, Japan Advanced Institute of Science and Technology (JAIST), 1-1 Asahi-dai, Nomi, Ishikawa 923-1292, Japan.
In this work, a molecule "walking" along a single chain of a synthetic helical polymer, which is used as a rail on a substrate in an organic solvent at room temperature, is observed. The walking comprises the unidirectional processive movement of a short-chain molecule along a chiral helical chain in 3 nm steps, driven by Brownian motion and a tapping effect of the atomic force microscopy tip based on a flash ratchet mechanism. Furthermore, the rail consists of a long-chain substituted phenylacetylene polymer with pendant cholesteryl groups, along which the short-chain molecule can walk as a result of van der Waals interactions.
View Article and Find Full Text PDFJ Chem Phys
June 2022
Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, USA.
The study of Brownian ratchets has taught how time-periodic driving supports a time-periodic steady state that generates nonequilibrium transport. When a single particle is transported in one dimension, it is possible to rationalize the current in terms of the potential, but experimental efforts have ventured beyond that single-body case to systems with many interacting carriers. Working with a lattice model of volume-excluding particles in one dimension, we analyze the impact of interactions on a flashing ratchet's current.
View Article and Find Full Text PDFBiophys J
May 2021
Department of Chemistry, College of Arts and Sciences, Purdue University Fort Wayne, Fort Wayne, Indiana.
The connector protein, also known as the portal protein, located at the portal vertex in the Phi29 bacteriophage has been found to play a key role in the genome DNA packaging motor. There is a disordered region, composed of 12 sets of 18-residue loops N229-N246, that has been assumed to serve as a "clamp" to retain the DNA within the pressurized capsid when DNA is fully packaged. However, the process remains undefined about how the clamping of DNA occurs and what signal is used to engage the channel loops to clamp the DNA near the end of DNA packaging.
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