In this paper, quantum chemical calculations for various cyano derivatives of thiophene and terthiophenes at the density functional theory (DFT) and ab initio Møller-Plesset (MP2) levels of theory are presented. In the case of the studied terthiophenes, CN groups located in the central part of the molecule lead to a preference of cis-cis geometry over trans-trans conformation. For alpha-substituted dicyano terthiophene, the investigation of torsional dependences shows that the highest energy barrier occurs at the perpendicular orientation of the aromatic rings. On the other hand, the dicyano substitution in the central part of terthiophene molecule exhibits the lowest energy barrier. Excitation energies were calculated using time-dependent density functional theory (TD-DFT). The obtained theoretical results show that the CN groups in alpha and beta positions have a distinct effect on the excitation energies and corresponding oscillator strengths. A CN group located in the alpha position causes a larger bathochromic shift than a CN group in the beta position. Besides, a CN group in the beta position has negligible influence on the position of the first absorption maximum.
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http://dx.doi.org/10.1021/jp805629u | DOI Listing |
J Chem Theory Comput
January 2025
State Key Laboratory of Physical Chemistry of Solid Surfaces and Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P. R. China.
Molecular docking is a crucial technique for elucidating protein-ligand interactions. Machine learning-based docking methods offer promising advantages over traditional approaches, with significant potential for further development. However, many current machine learning-based methods face challenges in ensuring the physical plausibility of generated docking poses.
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"VINČA" Institute of Nuclear Sciences - National Institute of the Republic of Serbia, University of Belgrade, 11001, Belgrade, Serbia.
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View Article and Find Full Text PDFBr J Radiol
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Department of Radiology, The First Affiliated Hospital of Xi'an Jiaotong University, Yanta Western Road, Xi'an, Shannxi, 710061.
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J Am Chem Soc
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National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, Beijing 100190, China.
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View Article and Find Full Text PDFJ Phys Chem Lett
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Institute of Bioproducts and Paper Technology, Graz University of Technologyy, Inffeldgasse 23, 8010 Graz, Austria.
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