Actin is a key regulator of RNA polymerase (pol) II transcription. In complex with specific hnRNPs, it has been proposed that actin functions to recruit pol II coactivators during the elongation of nascent transcripts. Here, we show by affinity chromatography, protein-protein interaction assays, and biochemical fractionation of nuclear extracts that the histone acetyltransferase (HAT) PCAF associates with actin and hnRNP U. PCAF and the nuclear actin-associated HAT activity detected in the DNase I-bound protein fraction could be released by disruption of the actin-hnRNP U complex. In addition, actin, hnRNP U, and PCAF were found to be associated with the Ser2/5- and Ser2-phosphorylated pol II carboxy-terminal domain construct. Chromatin and RNA immunoprecipitation assays demonstrated that actin, hnRNP U, and PCAF are present at the promoters and coding regions of constitutively expressed pol II genes and that they are associated with ribonucleoprotein complexes. Finally, disruption of the actin-hnRNP U interaction repressed bromouridine triphosphate incorporation in living cells, suggesting that actin and hnRNP U cooperate with PCAF in the regulation of pol II transcription elongation.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2577438PMC
http://dx.doi.org/10.1128/MCB.00766-08DOI Listing

Publication Analysis

Top Keywords

actin hnrnp
20
hnrnp pcaf
12
histone acetyltransferase
8
pcaf associates
8
associates actin
8
rna polymerase
8
pol transcription
8
disruption actin-hnrnp
8
actin
7
pcaf
6

Similar Publications

Article Synopsis
  • Spermatogenesis is the process in the testis that produces sperm cells, crucial for species reproduction, and depends on the support from Sertoli cells.
  • The reorganization of the actin cytoskeleton in Sertoli cells is essential for this process, but how this happens is not fully understood.
  • Research shows that the RNA-binding protein PTBP1 regulates this cytoskeleton reorganization by influencing the splicing of proteins that control actin dynamics, specifically by affecting the inclusion of certain exons in the Tnik kinase gene, which is important for maintaining cellular structures that support sperm development.
View Article and Find Full Text PDF

PTBP1-mediated repression of neuron-specific CDC42 splicing constitutes a genomic alteration-independent, developmentally conserved vulnerability in IDH-wildtype glioblastoma.

Funct Integr Genomics

August 2024

Department of Biology, Beijing Key Laboratory of Gene Resource and Molecular Development, and Key Laboratory of Cell Proliferation and Regulation Biology, Ministry of Education, School of Life Sciences , Beijing Normal University, Beijing, China.

Gene co-expression networks may encode hitherto inadequately recognized vulnerabilities for adult gliomas. By identifying evolutionally conserved gene co-expression modules around EGFR (EM) or PDGFRA (PM), we recently proposed an EM/PM classification scheme, which assigns IDH-wildtype glioblastomas (GBM) into the EM subtype committed in neural stem cell compartment, IDH-mutant astrocytomas and oligodendrogliomas into the PM subtype committed in early oligodendrocyte lineage. Here, we report the identification of EM/PM subtype-specific gene co-expression networks and the characterization of hub gene polypyrimidine tract-binding protein 1 (PTBP1) as a genomic alteration-independent vulnerability in IDH-wildtype GBM.

View Article and Find Full Text PDF

Proteomic profiling of laser capture microdissection kidneys from diabetic nephropathy patients.

J Chromatogr B Analyt Technol Biomed Life Sci

August 2024

Comprehensive Health Industry Research Center, Taizhou Research Institute, Southern University of Science and Technology, Taizhou 317000, China; The First Affiliated Hospital, School of Medicine, Anhui University of Science and Technology, Huainan 232001, Anhui, China. Electronic address:

Article Synopsis
  • Diabetic nephropathy (DN) is the leading cause of end-stage renal disease (ESRD) and requires focused analysis of different kidney tissue regions for effective diagnosis and treatment.
  • The study examined proteomic characteristics using samples from 5 DN patients and 5 healthy controls, highlighting reduced expression of key proteins in renal tissues and identifying significant pathways related to cell movement and glucose metabolism.
  • Findings point towards glycolytic metabolic disorders and alterations in glomerular structures as crucial aspects of DN, paving the way for future research on biomarkers and disease mechanisms.
View Article and Find Full Text PDF
Article Synopsis
  • - Myoepithelial carcinoma (MC) is a rare tumor primarily found in salivary glands and occasionally in soft tissue, displaying both epithelial and smooth muscle characteristics, often affecting the extremities.
  • - A case of retroperitoneal MC was accurately diagnosed using cytological findings combined with immunocytochemistry and fluorescence in situ hybridization to identify specific genetic rearrangements.
  • - The study highlights the importance of recognizing the unique features of this tumor and using additional testing methods to address diagnostic challenges, as there are very few reported cases of soft tissue MC in medical literature.
View Article and Find Full Text PDF

Aberrant condensation and localization of the RNA-binding protein (RBP) fused in sarcoma (FUS) occur in variants of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). Changes in RBP function are commonly associated with changes in axonal cytoskeletal organization and branching in neurodevelopmental disorders. Here, we asked whether branching defects also occur in vivo in a model of FUS-associated disease.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!