Enclosed experimental ecosystems (mesocosms) are small relative to their natural counterparts, are typically operated for short durations relative to the timescales of a number of important ecological processes, and also often have reduced biological and physical complexity relative to nature. These reductions in time, space, and complexity scales have been cited as sources of unrealistic ecological behavior within mesocosms and raise questions about extrapolating results from mesocosms to nature. Dimensional analysis, a technique widely used by engineers to create scale models, uses compensatory distortion as a means of maintaining dynamic similarity in properties and relationships of interest. Although biological parameters are generally less controllable than physical ones, a variety of dimensional approaches can be taken to maintain such key ecological properties as effective habitat size, environmental variability, vertical and horizontal gradients, interactions among habitats, and control of experimental artifacts. To date, application of dimensional approaches to mesocosm design has been largely intuitive and idiosyncratic. We argue that a more explicit, systematic, and quantitative approach will increase realism and may also provide a critical means of developing, testing, and advancing our understanding of scaling relationships in nature.
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http://dx.doi.org/10.1086/319197 | DOI Listing |
Breast Cancer Res Treat
January 2025
Department of Radiological Technology, Faculty of Medical Technology, Niigata University of Health and Welfare, 1398 Shimamichou, Kita-Ku, Niigata, Japan.
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View Article and Find Full Text PDFMetab Brain Dis
January 2025
Chengdu University of Traditional Chinese Medicine, Chengdu, 611137, Sichuan, P.R. China.
The immune system has emerged as a major factor in the pathogenesis of Alzheimer's disease (AD). PANoptosis is a newly defined programmed cell death mechanism related to many inflammatory diseases. This study aimed to identify the differentially expressed (DE) PANoptosis-related genes with characteristics of immune dysregulation (PRGIDs) in AD using bioinformatics analysis of bulk RNA-seq and single-nuclei RNA sequencing (snRNA-seq) data.
View Article and Find Full Text PDFPathologie (Heidelb)
January 2025
Institut für Pathologie, Fachbereich Thorax- und Molekularpathologie, Universitätsmedizin Göttingen, Robert-Koch-Straße 40, 37075, Göttingen, Deutschland.
Background: Pathology, traditionally focused on classification and diagnosis, is continuously evolving through new technologies. Advances in proteomics, epigenetics, tissue staining, and 3D imaging expand the possibilities of classical morphology.
Aim Of The Study: The aim of this study was to investigate how modern technologies can improve diagnostic accuracy and therapy selection and how they can be integrated into pathologic routine diagnostics.
J Chem Theory Comput
January 2025
Institute of Physical Chemistry, RWTH Aachen University, Aachen 52074, Germany.
Exploring the conformational space of molecules remains a challenge of fundamental importance to quantum chemistry: identification of relevant conformers at ambient conditions enables predictive simulations of almost arbitrary properties. Here, we propose a novel approach, called TTConf, to enable conformational sampling of large organic molecules where the combinatorial explosion of possible conformers prevents the use of a brute-force systematic conformer search. We employ tensor trains as a highly efficient dimensionality reduction algorithm, effectively reducing the scaling from exponential to polynomial.
View Article and Find Full Text PDFRev Sci Instrum
January 2025
Optics Research Group, Imaging Physics Department, Delft University of Technology, Van der Waalsweg 8, 2628 CH Delft, The Netherlands.
We demonstrate a broadband implementation of coherent Fourier scatterometry (CFS) using a supercontinuum source. Spectral information can be resolved by splitting the incident field into two pulses with a variable delay and interfering them at the detector after interaction with the sample, bearing similarities with Fourier-transform spectroscopy. By varying the time delay between the pulses, a collection of diffraction patterns is captured in the Fourier plane, thereby obtaining an interferogram for every camera pixel.
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