Oligonucleotide analogues were synthesized whose internucleoside linker contains an amide bond and a methylamino group (C3'-NH-CO-CH2-N(CH3)-C5'). Melting curves for duplexes formed by modified oligonucleotides and natural oligonucleotides complementary to them were measured, and the melting temperatures and thermodynamic parameters of duplex formation were calculated. The introduction of one modified dinucleoside linker into the oligonucleotide only slightly decreases the melting temperatures of these duplexes compared with unmodified ones. The CD spectra of modified duplexes were studied, and their spatial structures are discussed.

Download full-text PDF

Source
http://dx.doi.org/10.1134/s1068162008040092DOI Listing

Publication Analysis

Top Keywords

melting temperatures
8
[oligonucleotide analogues
4
analogues internucleotide
4
internucleotide linker
4
linker c3'-nh-co-ch2-nch3-c5']
4
c3'-nh-co-ch2-nch3-c5'] oligonucleotide
4
oligonucleotide analogues
4
analogues synthesized
4
synthesized internucleoside
4
internucleoside linker
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!