Shewanella decolorationis S12, a representative dissimilatory azo-reducing bacterium of Shewanella genus, can grow by coupling the oxidation of hydrogen to the reduction of azo compounds as the sole electron acceptor, indicating that an uptake hydrogenase is an important component for electron transfer for azoreduction. For searching to the uptake hydrogenase in the genome of S. decolorationis, two operons, hyd and hya, were cloned and sequenced, which encode periplasmically oriented Fe-only hydrogenase and a Ni-Fe hydrogenase, respectively, according to the homologous comparison with other bacterial hydrogenases. In order to assess the roles of these two enzymes in hydrogen-dependent azoreduction and growth, hyd- and hya-deficient mutants were generated by gene replacement. Hya was found to be required for hydrogen-dependent reduction of azo compound by resting cell suspensions and to be essential for growth with hydrogen as electron donor and azo compound as electron acceptor. Hyd, in contrast, was not. These findings suggest that Hya is an essential respiratory hydrogenase of dissimilatory azoreduction in S. decolorationis.
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http://dx.doi.org/10.1007/s00253-008-1597-9 | DOI Listing |
FEMS Microbiol Ecol
November 2024
Department of Plant Physiology, UPSC, Umeå University, 90187 Umeå, Sweden.
Uptake hydrogenase (Hup) recycles H2 formed by nitrogenase during nitrogen fixation, thereby preserving energy. Among root nodule bacteria, most rhizobial strains examined are Hup-, while only one Hup- Frankia inoculum had been identified. Previous analyses had led to the identification of two different [NiFe] hydrogenase syntons.
View Article and Find Full Text PDFbioRxiv
July 2024
Department of Comparative Pathobiology, Purdue University, West Lafayette, IN 47907.
Cyanobacteria have developed an impressive array of proteins and pathways, each tailored for specific metabolic attributes, to execute photosynthesis and biological nitrogen (N)-fixation. An understanding of these biologically incompatible processes provides important insights into how they can be optimized for renewable energy. To expand upon our current knowledge, we performed label-free quantitative proteomic analysis of the unicellular diazotrophic cyanobacterium ATCC 51142 grown with and without nitrate under 12-hour light-dark cycles.
View Article and Find Full Text PDFBioresour Technol
July 2024
Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Symbiosis between Glycine max and Bradyrhizobium diazoefficiens were used as a model system to investigate whether biohydrogen utilization promotes the transformation of the tetrachlorobiphenyl PCB77. Both a H uptake-positive (Hup) strain (wild type) and a Hup strain (a hupL deletion mutant) were inoculated into soybean nodules. Compared with Hup nodules, Hup nodules increased dechlorination significantly by 61.
View Article and Find Full Text PDFEnviron Res
April 2024
Research Center for Chemistry, Biology and Agriculture Research, University of Campinas (CPQBA/Unicamp), Paulínia, SP, Brazil.
Improving anaerobic digestion of sugarcane vinasse - a high-strength wastewater from ethanol distillation - is a subject of great interest, in view of the reduction of the pollutants and recovery of methane and valuable metabolites as byproducts. Through metatranscriptomic analysis, this study evaluated the active microbiome and metabolic pathways in a continuous acidogenic reactor: Stage 1S (control): 100% sucrose-based substrate (SBS); Stage 2SV (acclimation): 50% SBS and 50% vinasse; Stage 3V: 100% vinasse. Metatranscriptome obtained from each Stage was subjected to taxonomic and functional annotations.
View Article and Find Full Text PDFPathogens
November 2023
Department of Microbiology and Immunology, Jacobs School of Medicine and Biomedical Sciences, State University of New York, Buffalo, NY 14203, USA.
is a common uropathogen and a leading cause of catheter-associated urinary tract infections (CAUTIs), which are often polymicrobial. Through a genome-wide screen, we previously identified two [NiFe] hydrogenases as candidate fitness factors for CAUTI: a Hyb-type Group 1c H-uptake hydrogenase and a Hyf-type Group 4a H-producing hydrogenase. In this study, we disrupted one gene of each system ( and ) and also generated a double mutant to examine the contribution of flexible H metabolism to growth and fitness in vitro and during experimental CAUTI.
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