First principles study of the reaction of formic and acetic acids with hydroxyl radicals.

J Phys Chem A

Department of Chemical and Biomolecular Engineering, 4 Engineering Drive 4, National University of Singapore, Singapore 117576.

Published: July 2008

The oxidation of formic and acetic acids with hydroxyl radicals was studied as a model for the oxidation of larger carboxylic acids using first principles calculations. For formic acid, the CBS-QB3 activation barriers of 14.1 and 12.4 kJ/mol for the acid and for the formyl channel, respectively, are within 3 kJ/mol of benchmark W1U values. Tunneling significantly enhances the rate coefficient for the acid channel and is responsible for the dominance of the acid channel at 298 K. At 298 K, tunneling correction factors of 339 and 2.0 were calculated for the acid and the formyl channel using the small-curvature tunneling method and the CBS-QB3 potential energy surface. The Wigner, Eckart, and zero-curvature tunneling methods severely underestimate the importance of tunneling for the acid channel. The resulting reaction rate coefficient of 0.98 x 10(5) m(3)/(mol x s) at 298 K is within a factor 2-3 of experimental values. For acetic acid, an activation barrier of 11.0 kJ/mol and a tunneling correction factor of 199 were calculated for the acid channel. Two mechanisms compete for hydrogen abstraction at the methyl group, with activation barriers of 11.9 and 12.5 kJ/mol and tunneling correction factors of 9.1 and 4.1 at 298 K. The resulting rate coefficient of 1.2 x 10(5) m(3)/(mol x s) at 298 K and branching ratio of 94% compare well with experimental data.

Download full-text PDF

Source
http://dx.doi.org/10.1021/jp802017qDOI Listing

Publication Analysis

Top Keywords

acid channel
16
rate coefficient
12
tunneling correction
12
formic acetic
8
acetic acids
8
acids hydroxyl
8
hydroxyl radicals
8
acid
8
activation barriers
8
acid formyl
8

Similar Publications

The majority of enantioselective organocatalytic reactions occur in apolar or weakly polar organic solvents. Nevertheless, the influence of solute-solvent van der Waals forces on the relative kinetics of competitive pathways remains poorly understood. In this study, we provide a first insight into the nature and strength of these interactions at the transition state level using advanced computational tools, shedding light into their influence on the selectivity.

View Article and Find Full Text PDF

We investigated several small viral proteins that reside and function in cellular membranes. These proteins belong to the viroporin family because they assemble into ion-conducting oligomers. However, despite forming similar oligomeric structures with analogous functions, these proteins have diverse amino acid sequences.

View Article and Find Full Text PDF

Preserving the balance of metabolic processes in endothelial cells (ECs) and vascular smooth muscle cells (VSMCs), is crucial for optimal vascular function and integrity. ECs are metabolically active and depend on aerobic glycolysis to efficiently produce energy for their essential functions, which include regulating vascular tone. Impaired EC metabolism is linked to endothelial damage, increased permeability and inflammation.

View Article and Find Full Text PDF

Neuropeptides are inter-cellular signaling molecules occurring throughout animals. Most neuropeptides bind and activate G-protein coupled receptors, but some also activate ionotropic receptors (or "ligand-gated ion channels"). This is exemplified by the tetra-peptide H-Phe-Met-Arg-Phe-NH (FMRFa), which activates mollusc and annelid FMRFa-gated sodium channels (FaNaCs) from the trimeric degenerin/epithelial sodium channel superfamily.

View Article and Find Full Text PDF

Role of the Dorsal Cortex of the Inferior Colliculus in the Precedence Effect.

Med Sci Monit

January 2025

Department of Otorhinolaryngology Head and Neck Surgery, Beijing Chaoyang Hospital, Capital Medical University, Beijing, China.

BACKGROUND The precedence effect (PE) is a physiological phenomenon for accurate sound localization in a reverberant environment. Physiological studies of PE have mostly focused on the central nucleus of the inferior colliculus (CNIC), which receives ascending and descending projections, as well as projections from the shell of the inferior colliculus (IC) and contralateral IC. However, the role of the dorsal cortex of the IC (DCIC), which receives ascending and descending projections to ensure sound information processing and conduction on PE formation, remains unclear.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!