How RNA unfolds and refolds.

Annu Rev Biochem

Department of Biological Sciences, University at Albany, State University of New York, Albany, NY 12222, USA.

Published: September 2008

AI Article Synopsis

  • Understanding RNA folding and unfolding is crucial due to its various functions, and single-molecule experiments have helped uncover key details about this process.
  • These experiments explore important questions, such as the energy needed to unfold RNA structures, the speed of unfolding, and how different proteins like helicases and RNA polymerases interact with RNA.
  • Techniques like optical tweezers and fluorescence methods are utilized to monitor and measure the dynamics of RNA, enhancing our understanding of its behavior.

Article Abstract

Understanding how RNA folds and what causes it to unfold has become more important as knowledge of the diverse functions of RNA has increased. Here we review the contributions of single-molecule experiments to providing answers to questions such as: How much energy is required to unfold a secondary or tertiary structure? How fast is the process? How do helicases unwind double helices? Are the unwinding activities of RNA-dependent RNA polymerases and of ribosomes different from other helicases? We discuss the use of optical tweezers to monitor the unfolding activities of helicases, polymerases, and ribosomes, and to apply force to unfold RNAs directly. We also review the applications of fluorescence and fluorescence resonance energy transfer to measure RNA dynamics.

Download full-text PDF

Source
http://dx.doi.org/10.1146/annurev.biochem.77.061206.174353DOI Listing

Publication Analysis

Top Keywords

polymerases ribosomes
8
rna
5
rna unfolds
4
unfolds refolds
4
refolds understanding
4
understanding rna
4
rna folds
4
folds unfold
4
unfold knowledge
4
knowledge diverse
4

Similar Publications

sp. nov., a new hyphomycete from desertified rocky soil in southwest China.

Int J Syst Evol Microbiol

January 2025

Laboratory for Conservation and Utilization of Bio-Resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming 650091, Yunnan, PR China.

Two strains of , identified based on morphology and phylogenetic analysis, were isolated from rocky desertification soils in Yunnan province. Phylogenetic analyses inferred from three loci (the internal transcribed spacer of the nuclear ribosomal RNA gene, β-tubulin and RNA polymerase II second-largest subunit) showed that the two strains formed a single clade and were introduced as a new species of , is characterized by having ampulliform or broadly fusiform conidiogenous cells and dark olivaceous-green, oblong-ellipsoidal conidia. Phylogenetically, is most closely related to , but it distinguishes the latter by longer and narrower conidia.

View Article and Find Full Text PDF

[Investigation of Virulence Genes in Campylobacter Species Isolated from Patients with Acute Diarrhea].

Mikrobiyol Bul

January 2025

Selçuk Üniversitesi Tıp Fakültesi, Tıbbi Mikrobiyoloji Anabilim Dalı, Konya.

Akut gastroenterit dünya genelinde en yaygın enfeksiyon hastalıklarından biridir. Bu hastalıklar gelişmekte olan ülkelerde çocuk ölümlerine ve ciddi ekonomik kayıplara neden olmuştur. Hastalık genellikle yaygın diyare şeklinde kendini gösterse de bazı olgularda şiddetli enfeksiyon belirtilerine, hatta ölümlere neden olmuştur.

View Article and Find Full Text PDF

Detection of Mycoplasma haemocanis and Candidatus Mycoplasma haematoparvum in shelter and pet dogs in Malaysia.

Trop Biomed

December 2024

Department of Veterinary Pathology & Microbiology, Faculty of Veterinary Medicine, Universiti Putra Malaysia, Serdang, Malaysia.

Canine haemotrophic mycoplasmosis is caused by mycoplasma haemopathogens, which includes Mycoplasma haemocanis (Mhc) and Candidatus Mycoplasma haematoparvum (CMhp). The Mhc and CMhp pose a health risk to dogs, particularly in immunocompromised and splenectomised dogs, as they lead to haemolytic anaemia. There is scarce information on the detection of Mycoplasma in dogs in Malaysia.

View Article and Find Full Text PDF

Molecular screening of Babesia, Hepatozoon, and Theileria (Apicomplexa: Piroplasmida) in ticks (Acari: Ixodidae) infesting farm ruminants in Peninsular Malaysia.

Trop Biomed

December 2024

Department of Medical Microbiology and Parasitology, Faculty of Medicine, Universiti Teknologi MARA, Sungai Buloh Campus, Jalan Hospital, 47000 Sungai Buloh, Selangor, Malaysia.

Ticks are obligate hematophagous arachnids that feed on both humans and animals. Despite the extensive research on detection of bacteria in ixodid ticks in Malaysia, there remains limited knowledge about the detection of protozoa in these ectoparasites, especially in those that feed on farm ruminants. In this study, 1,241 ticks belonging to four species (Rhipicephalus microplus, R.

View Article and Find Full Text PDF

Bovine anaplasmosis is a tick-borne disease in cattle which is mainly caused by Anaplasma marginale and Anaplasma centrale. It poses significant economic burdens and threat on livestock industries worldwide. This study aimed to identify Anaplasma spp.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!