Ion transport in biological and synthetic nanochannels is characterized by phenomena such as ion current fluctuations and rectification. Recently, it has been demonstrated that nanofabricated synthetic pores can mimic transport properties of biological ion channels [P. Yu. Apel, Nucl. Instrum Methods Phys. Res. B 184, 337 (2001); Z. Siwy, Europhys. Lett. 60, 349 (2002)]. Here, the ion current rectification is studied within a reduced one-dimensional (1D) Poisson-Nernst-Planck (PNP) model of synthetic nanopores. A conical channel of a few nm to a few hundred nm in diameter, and of a few mum long is considered in the limit where the channel length considerably exceeds the Debye screening length. The rigid channel wall is assumed to be weakly charged. A one-dimensional reduction of the three-dimensional problem in terms of corresponding entropic effects is put forward. The ion transport is described by the nonequilibrium steady-state solution of the 1D Poisson-Nernst-Planck system within a singular perturbation treatment. An analytic formula for the approximate rectification current in the lowest order perturbation theory is derived. A detailed comparison between numerical results and the singular perturbation theory is presented. The crucial importance of the asymmetry in the potential jumps at the pore ends on the rectification effect is demonstrated. This so constructed 1D theory is shown to describe well the experimental data in the regime of small-to-moderate electric currents.
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http://dx.doi.org/10.1103/PhysRevE.77.031131 | DOI Listing |
Math Biosci Eng
May 2024
Beijing Institute of Mathematical Sciences and Applications (BIMSA), Beijing 101408, China.
This study investigated how permanent charges influence the dynamics of ionic channels. Using a quasi-one-dimensional classical Poisson-Nernst-Planck (PNP) model, we investigated the behavior of two distinct ion species-one positively charged and the other negatively charged. The spatial distribution of permanent charges was characterized by zero values at the channel ends and a constant charge $ Q_0 $ within the central region.
View Article and Find Full Text PDFSoft Matter
May 2024
Department of Mechanical Engineering, University of Kurdistan, Sanandaj 66177-15175, Iran.
Conical nanochannels employed to create ionic current rectification (ICR) in nanofluidic devices are prone to clogging due to the contraction at one end. As an alternative approach for creating ICR, a cylindrical nanochannel covered with a polyelectrolyte layer (PEL) of variable thickness is proposed in the present study. The efficacy of the proposed design is studied by numerically solving the governing equations including the Poisson, Nernst-Planck, and Stokes-Brinkman equations.
View Article and Find Full Text PDFMath Biosci Eng
January 2024
College of Mathematics and Systems Science, Shandong University of Science and Technology, Qingdao 266590, Shandong, China.
We consider a quasi-one-dimensional Poisson-Nernst-Planck model with two cations having the same valances and one anion. Bikerman's local hard-sphere potential is included to account for ion size effects. Under some further restrictions on the boundary conditions of the two cations, we obtain approximations of the I-V (current-voltage) relations by treating the ion sizes as small parameters.
View Article and Find Full Text PDFMembranes (Basel)
January 2023
College of Mathematics and Systems Science, Shandong University of Science and Technology, Qingdao 266590, China.
We focus on a quasi-one-dimensional Poisson-Nernst-Planck model with small permanent charges for ionic flows of two oppositely charged ion species through an ion channel. Of particular interest is to examine the dynamics of ionic flows in terms of I-V (current-voltage) relations with boundary layers due to the relaxation of neutral conditions on boundary concentrations. This is achieved by employing the regular perturbation analysis on the solutions established through geometric singular perturbation analysis.
View Article and Find Full Text PDFJ Phys Chem B
March 2022
Key Laboratory of Microelectronics Devices & Integrated Technology, Institute of Microelectronics, Chinese Academy of Sciences, Beijing 100029, China.
Originating from the ionic concentration polarization, ionic current rectification (ICR) is closely related to ion selectivity. Since it is the region with the greatest selectivity, the tip of the conical nanopore became the focus of research. However, even if the characteristic of the tip is fixed, the changes of pore length and cone angle still affect the magnitude of ICR─rectification factor (RF).
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