The influence of the mixed inoculum on the species-identification and antimicrobial susceptibility test results was evaluated for the three automated microbial systems, WalkAway-40 (Dade MicroScan, West Sacramento, CA, USA), VITEK 2 Compact (bioMérieux, Marcy l'Etoile, France) and RAISUS (Nissui Pharmaceutical, Tokyo). In the evaluation, two different species or two different strains were mixed in serial ratios and adjusted to the inoculum cell suspension for the respective systems, and then tested for the species-identification and antimicrobial susceptibility. For the species-identification, all the three automated systems experienced incorrect identifications others from the species inoculated with higher likelihoods (> 90%), e.g. Enterobacter cloacae plus Klebsiella pneumoniae resulted in K. ornithinolytica or E. aerogenes with 93% to 97% likelihoods at the mixing ratio 9 to 1. Whereas, the mixings extended-spectrum beta-lactamase (ESBL)-producing and non-producing Escherichia coli, methicillin-resistant (MRSA) and methicillin-susceptible Staphylococcus aureus, and vancomycin-resistant (VR) and vancomycin-susceptible (VS) Enterococcus faecalis, always resulted in correct detection of a small portion of resistant cells. However, minimum ratios of resistant cells for the correct detection varied by the systems, that is, RAISUS required 70% of MRSA, VITEK 2 Compact was 8%, and the WalkAway-40 was 1%. Also, when the cell suspension of VS E. faecalis spiked with Proteus mirabilis was tested, the WalkAway-40 reported as being very rare biotype, but both VITEK 2 Compact and RAISUS reported as the test inoculum being VR E. faecalis. With these results, it can be concluded that: First, incorrect species-identifications others from the inoculated species easily occur when the inoculum contains different species even at the ratio visibly indiscernible on the primary isolation agar plate. Secondly, the automated microbial systems always intend to detect antimicrobial resistant cells in the inoculum rather than to detect major susceptible cells to prevent us from reporting very major error interpretation.
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J Infect Chemother
December 2024
Clinical Laboratory, Saitama Medical University International Medical Center, Saitama, Japan; Department of Laboratory Medicine, Saitama Medical University International Medical Center, Saitama, Japan. Electronic address:
Introduction: Urinary tract infections (UTIs) are one of the most common bacterial infections and a major cause of sepsis. It is important to promptly diagnose and treat UTIs.
Method: We found that a Gram-staining score of ≥2+ could be substituted for a colony-forming unit value of ≥10,000/mL.
Acta Trop
December 2024
One Health Research Group. Universidad de Las Américas. Quito. Ecuador. Electronic address:
In the Andean region of South America, guinea pigs (Cavia porcellus) are raised as livestock in close contact with other domestic animals and humans. Although the susceptibility of guinea pigs to being affected by a wide range of diseases is well known as a laboratory animal model, there are a few reports about the potential role of zoonotic pathogens in livestock guinea pigs. In this work, we analyzed the nasopharyngeal carriage of respiratory pathogenic viruses and bacteria in guinea pigs from farms in Ecuador.
View Article and Find Full Text PDFNPJ Biosens
December 2024
Department of Pharmaceutical Sciences, University of Nebraska Medical Center, Omaha, NE 68198-6858 USA.
Evolution of antimicrobial-resistant bacterial species is on a rise. This review aims to explore the diverse range of paper-based platforms designed to identify antimicrobial-resistant bacterial species. It highlights the most important targets used for sensor development and examines the applications of nanosized particles used in paper-based sensors.
View Article and Find Full Text PDFPol J Microbiol
December 2024
Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Opportunistic infections caused by fungi, particularly those occurring in immunocompromised patients, are considered challenging worldwide. Therefore, a comprehensive understanding of pathogenic fungi is necessary. The present study reports the isolation of a strain of , which is difficult to detect using conventional clinical assays, from the sterile urine samples of a patient with a urinary tract infection.
View Article and Find Full Text PDFJ Infect Public Health
January 2025
Longgang Maternity and Child Institute of Shantou University Medical College (Longgang District Maternity & Child Healthcare Hospital of Shenzhen City), Clinical Laboratory, Shenzhen, Guangdong 518172, China. Electronic address:
Objectives: The spread of CRE has been rapid on a global scale and represents a significant challenge in nosocomial infections worldwide. The aim is to evaluate the risk factors for CRE colonization and to describe the molecular and clinical characteristics of CRE colonization in pediatric inpatients in Shenzhen, China.
Methods: We collected stool specimens from 2474 randomly selected pediatric inpatient hospitalized in 2 pediatric hospitals in Shenzhen between January 2023 and December 2023 for subsequent microbiological analysis, including microbial culture, species identification, antimicrobial sensitivity testing, genetic characterization and multilocus sequence typing (MLST).
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