Breast cancer is the leading form of cancer diagnosed in women, and the second leading cause of cancer mortality in this group. A commonly accepted grading system for breast cancer that has proven useful for guiding treatment strategy is the modified Bloom-Richardson system. However, this system is subject to interobserver variability, which can affect patient management and outcome. Hence, there is a need for an independent objective and reproducible breast cancer-grading tool to reduce interobserver variability. In this work, we hypothesized that architectural complexity of epithelial structures increases with decreasing differentiation in ductal carcinoma of the breast. To test this hypothesis, we explored the potential of a computer-based approach using fractal image analysis to quantitatively measure the complexity of breast histology specimens and investigate the relationship between increasing fractal dimension and tumor grade. More specifically, we developed an optimal staining and computational technique to compute the fractal dimensions of breast sections of grades 1, 2, and 3 tumors, assigned by a breast cancer pathologist, and compared the mean fractal dimensions between the tumor grades. We found that significant differences (P < .0005) exist between the mean fractal dimensions corresponding to the 3 tumor grades, and that the mean fractal dimension increases with increasing tumor grade. These results indicate that breast tumor differentiation can be characterized by the degree of architectural complexity of epithelial structures. They also indicate that fractal dimension has potential as an objective, reproducible, and automated measure of architectural complexity that may help reduce interobserver variability in grading.
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http://dx.doi.org/10.1016/j.humpath.2007.10.001 | DOI Listing |
PLoS Genet
January 2025
Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
Recent statistical approaches have shown that the set of all available genetic variants explains considerably more phenotypic variance of complex traits and diseases than the individual variants that are robustly associated with these phenotypes. However, rapidly increasing sample sizes constantly improve detection and prioritization of individual variants driving the associations between genomic regions and phenotypes. Therefore, it is useful to routinely estimate how much phenotypic variance the detected variants explain for each region by taking into account the correlation structure of variants and the uncertainty in their causal status.
View Article and Find Full Text PDFJ Exp Bot
January 2025
EGFV, Univ. Bordeaux, Bordeaux Sciences Agro, INRAE, ISVV, 33882 Villenave d'Ornon, France.
Adaptation to drought is one of the most important challenges for agriculture. The root system, and its integration with the soil, is fundamental in conferring drought tolerance. At the same time, it is extremely challenging to study.
View Article and Find Full Text PDFNeuroradiol J
January 2025
Department of Neurosurgery, Beijing Tsinghua Changgung Hospital, School of Clinical Medicine, Tsinghua University, China.
Background: The spinal arteriovenous malformations (sAVMs) have been challenging entities to diagnose and treat. The small structure, important function, and complex vascular anatomy of the spinal cord increase the difficulty of treating sAVMs.
Objective: The combining holistic and local perspectives in the diagnosis and treatment of sAVMs were provided to teach spinal vascular anatomy and AVMs.
J Cell Biol
March 2025
Cell Biology and Biophysics Unit, European Molecular Biology Laboratory (EMBL) , Heidelberg, Germany.
How cells establish the interphase genome organization after mitosis is incompletely understood. Using quantitative and super-resolution microscopy, we show that the transition from a Condensin to a Cohesin-based genome organization occurs dynamically over 2 h. While a significant fraction of Condensins remains chromatin-bound until early G1, Cohesin-STAG1 and its boundary factor CTCF are rapidly imported into daughter nuclei in telophase, immediately bind chromosomes as individual complexes, and are sufficient to build the first interphase TAD structures.
View Article and Find Full Text PDFActa Orthop
January 2025
Department of Orthopaedic Surgery, Danderyd Hospital, Stockholm; 2 Department of Clinical Sciences at Danderyd Hospital, Karolinska Institutet, Stockholm, Sweden.
Background And Purpose: Hand fractures are commonly presented in emergency departments, yet diagnostic errors persist, leading to potential complications. The use of artificial intelligence (AI) in fracture detection has shown promise, but research focusing on hand metacarpal and phalangeal fractures remains limited. We aimed to train and evaluate a convolutional neural network (CNN) model to diagnose metacarpal and phalangeal fractures using plain radiographs according to the AO/OTA classification system and custom classifiers.
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