Observation of a dynamic crossover in RNA hydration water which triggers a dynamic transition in the biopolymer.

Phys Rev E Stat Nonlin Soft Matter Phys

Department of Nuclear Science and Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

Published: January 2008

AI Article Synopsis

  • High-resolution quasielastic neutron scattering was used to study the dynamics of RNA samples in both H2O and D2O solutions, with temperature variations from 270 K to 180 K.
  • The difference in scattering signals from the samples allowed for the isolation of contributions from RNA, revealing a fragile-to-strong dynamic crossover in the hydration water at approximately 220 K.
  • The sharp change in slope of mean-square displacements of hydrogen atoms in both RNA and its surrounding water at 220 K indicates that the transition in RNA dynamics is influenced by the change in mobility of the hydration water at the same temperature.

Article Abstract

High-resolution quasielastic neutron scattering spectroscopy was used to measure H2O and D2O hydrated RNA samples. The contribution of scattering from RNA was subtracted out by taking the difference of the signals between the two samples. The measurements were made at a series of temperatures from 270 K down to 180 K. The relaxing-cage model was used to analyze the difference quasielastic spectra. We observed clear evidence of a fragile-to-strong dynamic crossover (FSC) at TL=220 K in RNA hydration water. We further show that the mean-square displacements of the hydrogen atoms in both RNA and its hydration water exhibit a sharp change in slope at approximately the same temperature 220 K. This latter fact suggests that the dynamic transition in RNA is triggered by the abrupt change of mobility of the hydration water at its FSC temperature.

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Source
http://dx.doi.org/10.1103/PhysRevE.77.011908DOI Listing

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