Clustering is inherently a difficult problem, both with respect to the definition of adequate models as well as to the optimization of the models. We present a model for the cluster problem that does not need knowledge about the number of clusters a priori. This property is among others useful in the image segmentation domain, which we especially address. Further, we propose a cellular coevolutionary algorithm for the optimization of the model. Within this scheme multiple agents are placed in a regular two-dimensional (2-D) grid representing the image, which imposes neighboring relations on them. The agents cooperatively consider pixel migration from one agent to the other in order to improve the homogeneity of the ensemble of the image regions they represent. If the union of the regions of neighboring agents is homogeneous then the agents form alliances. On the other hand, if an agent discovers a deviant subject, it isolates the subject. In the experiments we show the effectiveness of the proposed method and compare it to other segmentation algorithms. The efficiency can easily be improved by exploiting the intrinsic parallelism of the proposed method.
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http://dx.doi.org/10.1109/TIP.2002.806256 | DOI Listing |
Nat Microbiol
January 2025
Faculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel.
Synechococcus is a significant primary producer in the oceans, coexisting with cyanophages, which are important agents of mortality. Bacterial resistance against phage infection is a topic of significant interest, yet little is known for ecologically relevant systems. Here we use exogenous gene expression and gene disruption to investigate mechanisms underlying intracellular resistance of marine Synechococcus WH5701 to the Syn9 cyanophage.
View Article and Find Full Text PDFGenome Biol Evol
December 2024
Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, Guangdong, China.
Protamines (PRMs) and transition nuclear proteins (TNPs) are two key classes of sperm nuclear basic proteins that regulate chromatin reorganization and condensation in the spermatozoon head, playing crucial roles in mammalian spermatogenesis. In scrotal mammals, such as humans, cryptorchidism, the failure of the testes to descend into the scrotal sac is generally associated with higher rates of defective spermatozoon quality and function. However, ascrotal mammals, such as cetaceans, with naturally undescended testes, produce normal spermatozoa similar to their scrotal counterparts.
View Article and Find Full Text PDFChaos
November 2024
Centre for Mathematical Sciences, Lund University, Märkesbacken 4, 223 62 Lund, Sweden.
Natural and technological networks exhibit dynamics that can lead to complex cooperative behaviors, such as synchronization in coupled oscillators and rhythmic activity in neuronal networks. Understanding these collective dynamics is crucial for deciphering a range of phenomena from brain activity to power grid stability. Recent interest in co-evolutionary networks has highlighted the intricate interplay between dynamics on and of the network with mixed time scales.
View Article and Find Full Text PDFCell Mol Neurobiol
October 2024
Department of Psychiatry, First Faculty of Medicine, Charles University and General University Hospital in Prague, Ke Karlovu 11, 120 00, Prague, Czech Republic.
Mitochondria, the cellular powerhouses with bacterial evolutionary origins, play a pivotal role in maintaining neuronal function and cognitive health. Several viruses have developed sophisticated mechanisms to target and disrupt mitochondrial function which contribute to cognitive decline and neurodegeneration. The interplay between viruses and mitochondria might be traced to their co-evolutionary history with bacteria and may reflect ancient interactions that have shaped modern mitochondrial biology.
View Article and Find Full Text PDFNature
November 2024
Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Eukaryotic innate immune systems use pattern recognition receptors to sense infection by detecting pathogen-associated molecular patterns, which then triggers an immune response. Bacteria have similarly evolved immunity proteins that sense certain components of their viral predators, known as bacteriophages. Although different immunity proteins can recognize different phage-encoded triggers, individual bacterial immunity proteins have been found to sense only a single trigger during infection, suggesting a one-to-one relationship between bacterial pattern recognition receptors and their ligands.
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