In the present work, we have investigated the molecular orientation of phthalocyanine films deposited on polycrystalline gold. Three films built from the following molecules are investigated: phthalocyanine (H2Pc), cobalt phthalocyanine (CoPc) and copper phthalocyanine (CuPc). The films are prepared by spin coating and drop casting methods. Orientation analysis has been performed using polarization dependent Fourier transform infrared (FTIR) spectroscopy using transmission and grazing angle reflectance mode. The FTIR study suggests that each phthalocyanine film contains both alpha- and beta-phases. H2Pc based films demonstrate deposition method dependence on the molecular orientation, while the CuPc and CoPc films preserve their molecular orientation independent of deposition method. Grazing angle analysis also suggests that CoPc films show negligible preferred orientation irrespective of film deposition methods. In literature, the band at 878 cm(-1) in CuPc has been assigned to out-of-plane bending of C-H. Our grazing angle experiments suggest that this band cannot be assigned to out-of-plane bending vibrations of C-H. Accurate band assignments are also described here for the phthalocyanine system.
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http://dx.doi.org/10.1016/j.saa.2007.10.050 | DOI Listing |
J Am Chem Soc
January 2025
Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, California 92093, United States.
Ice interfaces are pivotal in mediating key chemical and physical processes such as heterogeneous chemical reactions in the environment, ice nucleation, and cloud microphysics. At the ice surface, water molecules form a quasi-liquid layer (QLL) with properties distinct from those of the bulk. Despite numerous experimental and theoretical studies, a molecular-level understanding of the QLL has remained elusive.
View Article and Find Full Text PDFSoft Matter
January 2025
Institute for X-Ray Physics, University of Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.
The eukaryotic cytoskeleton is an intricate network of three types of mechanically distinct biopolymers - actin filaments, microtubules and intermediate filaments (IFs). These filamentous networks determine essential cellular functions and properties. Among them, microtubules are important for intracellular transport and establishing cell polarity during migration.
View Article and Find Full Text PDFBiomater Sci
January 2025
Beijing Advanced Innovation Center for Biomedical Engineering, Key Laboratory of Ministry of Education for Biomechanics and Mechanobiology, School of Engineering Medicine & School of Biological Science and Medical Engineering, Beihang University, Beijing 100191, China.
Tumor cells can escape from immune killing by binding their programmed death ligand-1 (PD-L1) to the programmed cell death protein 1 (PD-1) of T cells. These immune checkpoint proteins (PD-L1/PD-1) have become very important drug targets, since blocking PD-L1 or PD-1 can recover the killing capability of T cells against tumor cells. Instead of targeting the binding interface between PD-L1 and PD-1, we explored the possibility of regulating the membrane orientation thermodynamics of PD-L1 with ligand-modified ultra-small hydrophobic nanoparticles (NPs) using μs-scale coarse-grained molecular dynamics (MD) simulations in this work.
View Article and Find Full Text PDFInt J Oncol
February 2025
Department of Experimental Medicine, Laboratory of Radiobiology, University of L'Aquila, I-67100 L'Aquila, Italy.
Following the publication of the above article, a concerned reader drew to the Editor's attention that certain of the western blot assay data shown in Fig. 4G on p. 717 were strikingly similar to data that had appeared in a paper published previously in the journal , which had been written by different authors at different research institutes.
View Article and Find Full Text PDFClin Chem
January 2025
Department of Obstetrics & Gynaecology, The Chinese University of Hong Kong, Hong Kong SAR, China.
Background: Mate-pair sequencing detects both balanced and unbalanced structural variants (SVs) and simultaneously informs in relation to both genomic location and orientation of SVs for enhanced variant classification and clinical interpretation, while chromosomal microarray analysis (CMA) only reports deletion/duplication. Herein, we evaluated its diagnostic utility in a prospective back-to-back prenatal comparative study with CMA.
Methods: From October 2021 to September 2023, 426 fetuses with ultrasound anomalies were prospectively recruited for mate-pair sequencing and CMA in parallel for prenatal genetic diagnosis.
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