Determination of a relationship between chitinase activity and microbial diversity in chitin amended compost.

Bioresour Technol

Department of Agricultural Sciences, Faculty of Life Sciences, University of Copenhagen, Thorvaldsensvej 40, DK-1871 Frederiksberg C, Denmark.

Published: July 2008

By using denaturing gradient gel electrophoresis (DGGE) and simultaneously measuring the enzymatic activity of chitinase, we could link genetic diversity of the indigenous microbial communities with chitinase activity in compost samples. A garden/park waste compost and a source separated organic household waste compost, showed different genetic diversity as measured by PCR-DGGE of total DNA extracted from the composts. The household waste compost had the highest chitinase activity. To increase chitinase activity, the two composts were amended with chitin. This addition induced a change in both the bacterial and fungal genetic diversity when compared to the non-amended compost samples. Likewise, both composts reacted to the addition of chitin with an increase in chitinase activity. Thus, a relationship between genetic diversity and chitinase activity was established for the composts in question. The N-mineralization in the household waste compost was apparently increased by the addition of chitin, while such an effect was not observed in the garden/park waste compost.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.biortech.2007.08.042DOI Listing

Publication Analysis

Top Keywords

chitinase activity
24
waste compost
20
genetic diversity
16
household waste
12
compost
8
compost samples
8
garden/park waste
8
increase chitinase
8
addition chitin
8
chitinase
7

Similar Publications

A case of bacteremia in a 38-year-old homeless male originating from a maggot-infested amputated foot.

IDCases

January 2025

University of Kansas Medical Center, Department of Internal Medicine, Division of Infectious Diseases, 3901 Rainbow Blvd., Mailstop 1028, Kansas City, KS 66160, USA.

() was first isolated from the larval stage of the fly vector It is a gram-negative, non-motile, strictly aerobic rod that thrives in temperatures between 28º C and 37º C. Its strong chitinase activity aids in metamorphosis, which suggests a symbiotic relationship with the fly. Although rare, has been implicated in human infections, like bacteremia and osteomyelitis, typically transmitted through fly larvae in skin wounds.

View Article and Find Full Text PDF

Alginate oligosaccharide induces resistance against Penicillium expansum in pears by priming defense responses.

Plant Physiol Biochem

January 2025

School of Food and Biological Engineering, Jiangsu University, Zhenjiang, 212013, Jiangsu, People's Republic of China. Electronic address:

The research intended to explore the control ability of alginate oligosaccharide (AOS) on Penicillium expansum infection in pear fruit by priming response and its mechanism. The results showed that 100 mg L AOS treatment could significantly reduce the incidence of postharvest blue mold and the lesion diameter in pear fruits and maintain their quality. The defense responses induced by AOS treatment alone were relatively mild in pear fruits.

View Article and Find Full Text PDF

Arbuscular mycorrhizal fungi (AMF) can preferentially absorb the released ammonium (NH) over nitrate (NO) during litter decomposition. However, the impact of AMF's absorption of NH on litter nitrogen (N) decomposition is still unclear. In this study, we investigated the effects of AMF uptake for NH on litter N metabolic characteristics by enriching NH via AMF suppression and nitrification inhibition in a subtropical forest.

View Article and Find Full Text PDF

PepGAT, a chitinase-derived peptide, alters the proteomic profile of colorectal cancer cells and perturbs pathways involved in cancer survival.

Int J Biol Macromol

January 2025

Laboratory of Bioinformatics Applied to Health, Drug Research and Development Center (NPDM), Federal University of Ceará, Fortaleza, CE 60430-275, Brazil; Pharmacogenetics Laboratory, Drug Research and Development Center (NPDM), Federal University of Ceará, Fortaleza, CE 60430-275, Brazil. Electronic address:

Colorectal cancer (CRC) affects the population worldwide, occupying the first place in terms of death and incidence. Synthetic peptides (SPs) emerged as alternative molecules due to their activity and low toxicity. Proteomic analysis of PepGAT-treated HCT-116 cells revealed a decreased abundance of proteins involved in ROS metabolism and energetic metabolisms, cell cycle, DNA repair, migration, invasion, cancer aggressiveness, and proteins involved in resistance to 5-FU.

View Article and Find Full Text PDF

High-speed atomic force microscopy reveals opposite traffic of processive chitinases impairs α-chitin biodegradation.

Carbohydr Polym

March 2025

State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China; Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China. Electronic address:

The antiparallelly organized α-chitin exhibits greater thermodynamic stability and is more recalcitrant to degradation than its parallel allomorph, β-chitin, thereby impeding the efficient utilization of this natural resource. The processive chitinases usually provide the majority of catalytic potential for chitin biodegradation. Using high-speed atomic force microscopy (HS-AFM), we revealed that the opposite traffic of OfChi-h, the only processive chitinase involved in chitin biodegradation in the insect Ostrinia furnacalis, is a key factor that significantly affects α-chitin degradation.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!