Photo-switchable compounds are becoming increasingly popular for a series of biological applications based on the reversible photo-control of structure and function of biomolecules. Three applications for the usage of BODTCM and hemithioindigo as photo-reactive compounds are described here. The structure of the villin headpiece was modified by replacing a part of the backbone with hemithioindigo, aiming at induction of the folding process by irradiation with a defined wavelength. The E-isomer of BODTCM was applied as potential inhibitor of the 12/15-lipoxygenase (12/15-LOX), which is implicated in the pathogenesis of inflammatory diseases. A required death domain for the binding of proapoptotic proteins (e.g. Bak) to the hydrophobic groove of antiapoptotic proteins is the BH3 helix. Inserting hemithioindigo into this short peptide, stabilization towards proteolytic degradation is achieved. Such photo-reactive compounds might be developed as potential drugs for a great variety of diseases.
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Chem Sci
August 2024
Department of Chemistry and Biochemistry, University of Delaware Newark Delaware 19716 USA
Dialkyldiazirines have emerged as a photo-reactive group of choice for interactome mapping in live cell experiments. Upon irradiation, 'linear' dialkyldiazirines produce dialkylcarbenes which are susceptible to both intramolecular reactions and unimolecular elimination processes, as well as diazoalkanes, which also participate in intermolecular labeling. Cyclobutylidene has a nonclassical bonding structure and is stable enough to be captured in bimolecular reactions.
View Article and Find Full Text PDFMethods Mol Biol
July 2022
CenterVirginia Polytechnic Institute and State University, School of Plant and Environmental Sciences, Alson H. Smith Jr. Agricultural Research and Extension Center, Winchester, VA, USA.
The accurate assessment of Erwinia amylovora live cell populations in fire blight cankers by classic microbiology methods has major limitations. Some of them are the presence of competitive microbiota in samples that inhibit E. amylovora's growth and the release of toxic compounds by plant material during sample processing, which may hamper the pathogen's ability to form colonies on solid media.
View Article and Find Full Text PDFSci Total Environ
October 2021
State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing, Jiangsu 210023, China. Electronic address:
Previous studies found Fe dissolution in atmosphere correlates to biomass burning, while the underlying mechanisms need to be further investigated. In this study, we reported a laboratory investigation about Fe dissolution behavior of two model Fe-bearing clay minerals of montmorillonite (SWy-2) and illite (IMt-2), and one standard mineral dust of Arizona test dust (AZTD) in atmospheric condition (pH = 2), after the minerals engaging into the brown-carbonization reaction with guaiacol, which is a commonly detected volatile phenol substance in biomass burning. The results show that the pre-brown-carbonization reaction promoted Fe dissolution from all the three minerals, attributing to the reduction of Fe(III) by gaseous guaiacol.
View Article and Find Full Text PDFFood Environ Virol
June 2020
Department of Frontier Science for Advanced Environment, Graduate School of Environmental Studies, Tohoku University, Aoba 6-6-06, Aramaki, Aoba-ku, Sendai, Miyagi, 980-8579, Japan.
Human noroviruses are the major cause of non-bacterial acute gastroenteritis worldwide. Since no therapeutic agent has been proven to prevent human norovirus infection yet, preventive healthcare interventions to block the infection routes play an important role in infection control. One of the possible infection routes of human noroviruses are through contaminated hands, but no hand antiseptics have been proven effective.
View Article and Find Full Text PDFTransfusion
February 2020
Center for Systems Biology, University of Iceland, Sturlugata 8, Reykjavik, Iceland.
Background: The risk of bacterial contamination and the deterioration of platelet (PLT) quality limit the shelf-life of platelet concentrates (PCs). The INTERCEPT pathogen inactivation system reduces the risk of pathogen transmission by inhibiting nucleic acid replication using a combination of a photo-reactive compound and UVA illumination. The goal of this study was to investigate the effects the INTERCEPT system has on the PLT metabolome and metabolic activity.
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