Unlabelled: SciRoKo is a user-friendly software tool for the identification of microsatellites in genomic sequences. The combination of an extremely fast search algorithm with a built-in summary statistic tool makes SciRoKo an excellent tool for full genome analysis. Compared to other already existing tools, SciRoKo also allows the analysis of compound microsatellites.
Availability: free for use: www.kofler.or.at/Bioinformatics.
Supplementary Information: Supplementary data are available at Bioinformatics online.
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http://dx.doi.org/10.1093/bioinformatics/btm157 | DOI Listing |
Int J Mol Sci
March 2022
DISAFA, Plant Genetics and Breeding, University of Turin, Largo P. Braccini 2, 10095 Grugliasco, Italy.
L. (2n = 2x = 16) is a perennial, allogamous, highly heterozygous plant marketed as a cut flower or in gardens. Due to its large genome size, limited efforts have been made in order to develop species-specific molecular markers.
View Article and Find Full Text PDFPLoS Negl Trop Dis
November 2018
Centro de Biologia Molecular e Engenharia Genética (CBMEG), Universidade Estadual de Campinas (UNICAMP), Campinas, São Paulo, Brazil.
Background: Giardia duodenalis (synonyms G. lamblia and G. intestinalis) is an enteric protozoan parasite of a wide range of mammalian hosts, including humans and various domestic and wild animals.
View Article and Find Full Text PDFBioinformation
September 2010
Centre of Biotechnology, School of Pharmaceutical Sciences, Siksha O Anusandhan University, Bhubaneswar-751003, India;
Turmeric (Curcuma longa L.) (Family: Zingiberaceae) is a perennial rhizomatous herbaceous plant often used as a spice since time immemorial. Turmeric plants are also widely known for its medicinal applications.
View Article and Find Full Text PDFBioinformatics
July 2007
University of Natural Resources and Applied Life Sciences, Department for Agrobiotechnology IFA-Tulln, Institute of Biotechnology in Plant Production, 3430 Tulln, Austria.
Unlabelled: SciRoKo is a user-friendly software tool for the identification of microsatellites in genomic sequences. The combination of an extremely fast search algorithm with a built-in summary statistic tool makes SciRoKo an excellent tool for full genome analysis. Compared to other already existing tools, SciRoKo also allows the analysis of compound microsatellites.
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