Unlabelled: We present a graphical tool dedicated to the exploration of bacterial genome rearrangements. The principle of this exploration relies on the reconstruction of ancestral genomes at each internal node of a gene-order-based phylogenetic tree. This tool allows the selection of internal nodes to visualize the rearrangements between the inferred chromosome of this node and its direct descendant on the tree.

Availability: PEGR is available at the Genopole Toulouse Bioinformatics platform.

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btm070DOI Listing

Publication Analysis

Top Keywords

exploration bacterial
8
phylogenetic exploration
4
bacterial genomic
4
genomic rearrangements
4
rearrangements unlabelled
4
unlabelled graphical
4
graphical tool
4
tool dedicated
4
dedicated exploration
4
bacterial genome
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!