The spherical harmonics (SPHARM) approach has been used for the representation of shapes in many types of biomedical image data. We propose a SPHARM-based similarity comparison for shape sequences that allows fast similarity searches for dynamic objects and demonstrate it using 3D images of a beating heart. By using spherical harmonics to extract a small number of features that represent cardiac shape in each sequential state, we enable indexing and pruning of database entries with a multidimensional index tree (e.g. R*-tree) for fast retrieval. Our approach relies on obtaining selected landmarks to allow normalization within and between sequences. This framework is extensible to other application domains.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1109/IEMBS.2004.1403914 | DOI Listing |
Nat Genet
January 2025
Department of Ecology and Evolution, The University of Chicago, Chicago, IL, USA.
In the past decade, our understanding of how new genes originate in diverse organisms has advanced substantially, and more than a dozen molecular mechanisms for generating initial gene structures were identified, in addition to gene duplication. These new genes have been found to integrate into and modify pre-existing gene networks primarily through mutation and selection, revealing new patterns and rules with stable origination rates across various organisms. This progress has challenged the prevailing belief that new proteins evolve from pre-existing genes, as new genes may arise de novo from noncoding DNA sequences in many organisms, with high rates observed in flowering plants.
View Article and Find Full Text PDFSci Rep
January 2025
Biological Resource Center, Korean Collection for Type Cultures (KCTC), Korea Research Institute of Bioscience and Biotechnology, Jeongeup, 56212, Republic of Korea.
Polysaccharides are recognized for their extensive biological functions, holding significant promise for applications in both medicine and food industries. However, their utilization is frequently constrained by challenges such as high molecular weights and indistinct sugar chain structures. Recently, two novel bacterial strains, N6 and J3, were isolated from the Nakdong River in Korea.
View Article and Find Full Text PDFSci Rep
January 2025
RITMO Centre for Interdisciplinary Studies in Rhythm, Time and Motion, University of Oslo, Forskningsveien 3A, Oslo, 0373, Norway.
Periodic sensory inputs entrain oscillatory brain activity, reflecting a neural mechanism that might be fundamental to temporal prediction and perception. Most environmental rhythms and patterns in human behavior, such as walking, dancing, and speech do not, however, display strict isochrony but are instead quasi-periodic. Research has shown that neural tracking of speech is driven by modulations of the amplitude envelope, especially via sharp acoustic edges, which serve as prominent temporal landmarks.
View Article and Find Full Text PDFEur J Protistol
January 2025
Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, PR China. Electronic address:
Diatom blooms are a global ecological perturbation that releases algal organic matter (AOM), significantly affecting coastal ecosystems by altering microbial community dynamics. AOM, derived from algal cell lysis, may serve as a nutrient source influencing protistan communities. However, the effects of AOM on protistan ecology, including the community structure and assembly processes, remain largely unexplored in coastal sediments.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
January 2025
Department of Life Sciences, University of Coimbra, CEMMPRE, ARISE, Coimbra, Portugal.
Three bacterial strains, designated FZUC8N2.13, FBOR7N2.3 and FZUR7N2.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!