Many graph drawing and visualization algorithms, such as force-directed layout and line-dot rendering, work very well on relatively small and sparse graphs. However, they often produce extremely tangled results and exhibit impractical running times for highly non-planar graphs with large edge density. And very few graph layout algorithms support dynamic time-varying graphs; applying them independently to each frame produces distracting temporally incoherent visualizations. We have developed a new visualization technique based on a novel approach to hierarchically structuring dense graphs via stratification. Using this structure, we formulate a hierarchical force-directed layout algorithm that is both efficient and produces quality graph layouts. The stratification of the graph also allows us to present views of the data that abstract away many small details of its structure. Rather than displaying all edges and nodes at once, resulting in a convoluted rendering, we present an interactive tool that filters edges and nodes using the graph hierarchy and allows users to drill down into the graph for details. Our layout algorithm also accommodates time-varying graphs in a natural way, producing a temporally coherent animation that can be used to analyze and extract trends from dynamic graph data. For example, we demonstrate the use of our method to explore financial correlation data for the U.S. stock market in the period from 1990 to 2005. The user can easily analyze the time-varying correlation graph of the market, uncovering information such as market sector trends, representative stocks for portfolio construction, and the interrelationship of stocks over time.
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http://dx.doi.org/10.1109/TVCG.2006.193 | DOI Listing |
Chaos
January 2025
School of Mathematical & Computer Sciences, Heriot-Watt University, EH14 4AS Edinburgh, United Kingdom.
Time-evolving graphs arise frequently when modeling complex dynamical systems such as social networks, traffic flow, and biological processes. Developing techniques to identify and analyze communities in these time-varying graph structures is an important challenge. In this work, we generalize existing spectral clustering algorithms from static to dynamic graphs using canonical correlation analysis to capture the temporal evolution of clusters.
View Article and Find Full Text PDFPsychiatry Res
December 2024
Department of Psychiatry, Sir Run-Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, PR China. Electronic address:
Background: Auditory verbal hallucinations (AVHs) in schizophrenia (SCZ) are linked to brain network abnormalities. Resting-state fMRI studies often assume stable networks during scans, yet dynamic changes related to AVHs are not well understood.
Methods: We analyzed resting-state fMRI data from 60 SCZ patients with persistent AVHs (p-AVHs), 39 SCZ patients without AVHs (n-AVHs), and 59 healthy controls (HCs), matched for demographics.
Int J Epidemiol
December 2024
School of Public Health, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China.
Background: Immortal time is a period of follow-up during which death or the study outcome cannot occur by design. Bias from immortal time has been increasingly recognized in epidemiological studies. However, the fundamental causes and structures of bias from immortal time have not been explained systematically.
View Article and Find Full Text PDFBMC Med Res Methodol
December 2024
Institute for Medical Information Processing, Biometry, and Epidemiology (IBE), Faculty of Medicine, Ludwig-Maximilians-Universität München, Marchioninistr. 15, 81377, Munich, Germany.
Environ Res
December 2024
Kintampo Health Research Centre, Research and Development Division, Ghana Health Service, Kintampo, Ghana.
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