A method for finding the center of cryo-EM images which correspond to the projections of a symmetric 3D structure, based on mathematical properties of symmetry adapted functions and the Fourier-Bessel transform, is presented. It is a model independent one-step procedure with no parameters to be chosen by the user. The proposed method is tested in one synthetic tetrahedral case with different noise levels and in two real cases with D7 and icosahedral symmetries.
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http://dx.doi.org/10.1016/j.jsb.2006.08.004 | DOI Listing |
Med Image Anal
January 2025
Department of Applied Mathematics, Technical Medical Centre, University of Twente, Drienerlolaan 5, 7522 NB Enschede, The Netherlands.
The orientation of a blood vessel as visualized in 3D medical images is an important descriptor of its geometry that can be used for centerline extraction and subsequent segmentation, labeling, and visualization. Blood vessels appear at multiple scales and levels of tortuosity, and determining the exact orientation of a vessel is a challenging problem. Recent works have used 3D convolutional neural networks (CNNs) for this purpose, but CNNs are sensitive to variations in vessel size and orientation.
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January 2025
College of Transportation Science and Engineering, Nanjing Tech University, Nanjing, 211816, China.
Large-scale rock burst disasters often occur in high-stress and deep-buried tunnels, due to challenges in accurate forecasting and the lack of clarity regarding the underlying mechanisms largely. This study combined on-site stress drilling tests, coupled finite and discrete element simulations, and theoretical calculations to examine unloading damage, rockburst evolution, and deformation failure of the high-stress and deep-buried Xuefengshan No.1 tunnel.
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January 2025
Department of Medical Engineering and Technology, Xinjiang Medical University, Urumqi, 830017, China.
Human brucellosis remains a significant public health issue in the Ili Kazak Autonomous Prefecture, Xinjiang, China. To assist local Centers for Disease Control and Prevention (CDC) in promptly formulate effective prevention and control measures, this study leveraged time-series data on brucellosis cases from February 2010 to September 2023 in Ili Kazak Autonomous Prefecture. Three distinct predictive modeling techniques-Seasonal Autoregressive Integrated Moving Average (SARIMA), eXtreme Gradient Boosting (XGBoost), and Long Short-Term Memory (LSTM) networks-were employed for long-term forecasting.
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January 2025
Department of Civil Engineering, Isfahan University of Technology, Isfahan, Iran.
Floods are among the most severe natural hazards, causing substantial damage and affecting millions of lives. These events are inherently multi-dimensional, requiring analysis across multiple factors. Traditional research often uses a bivariate framework relying on historical data, but climate change is expected to influence flood frequency analysis and flood system design in the future.
View Article and Find Full Text PDFSubcell Biochem
December 2024
School of Biomedical Sciences, The University of New South Wales, Sydney, NSW, Australia.
Electron microscopy (EM) techniques have been crucial for understanding the structure of biological specimens such as cells, tissues and macromolecular assemblies. Viruses and related viral assemblies are ideal targets for structural studies that help to define essential biological functions. Whereas conventional EM methods use chemical fixation, dehydration, and staining of the specimens, cryogenic electron microscopy (cryo-EM) preserves the native hydrated state.
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