The theme of the third annual Spring workshop of the HUPO-PSI was "proteomics and beyond" and its underlying goal was to reach beyond the boundaries of the proteomics community to interact with groups working on the similar issues of developing interchange standards and minimal reporting requirements. Significant developments in many of the HUPO-PSI XML interchange formats, minimal reporting requirements and accompanying controlled vocabularies were reported, with many of these now feeding into the broader efforts of the Functional Genomics Experiment (FuGE) data model and Functional Genomics Ontology (FuGO) ontologies.

Download full-text PDF

Source
http://dx.doi.org/10.1002/pmic.200600452DOI Listing

Publication Analysis

Top Keywords

annual spring
8
spring workshop
8
workshop hupo-psi
8
minimal reporting
8
reporting requirements
8
functional genomics
8
proteomics report
4
report 3rd
4
3rd annual
4
hupo-psi 21-23
4

Similar Publications

of long-term and future climate variability is crucial for impact assessment studies in drought-prone areas like the Giba basin in northern Ethiopia. This study has applied the statistical downscaling model (SDSM) and (De Martonne and Pinna combinative) aridity index methods to evaluate the climate system of the Giba basin. Historical data (1961-2019) from seven meteorological stations and global grided data were used for future climate projections (2020-2100) under the three emission scenarios (RCPs 2.

View Article and Find Full Text PDF

Vegetation Types Shift Physiological and Phenological Controls on Carbon Sink Strength in a Coastal Zone.

Glob Chang Biol

January 2025

Key Laboratory of Coastal Zone Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, Shandong, China.

The carbon sink function performed by the different vegetation types along the environmental gradient in coastal zones plays a vital role in mitigating climate change. However, inadequate understanding of its spatiotemporal variations across different vegetation types and associated regulatory mechanisms hampers determining its potential shifts in a changing climate. Here, we present long-term (2011-2022) eddy covariance measurements of the net ecosystem exchange (NEE) of CO at three sites with different vegetation types (tidal wetland, nontidal wetland, and cropland) in a coastal zone to examine the role of vegetation type on annual carbon sink strength.

View Article and Find Full Text PDF

The Influence of Migration Timing and Local Conditions on Reproductive Timing in Arctic-Breeding Birds.

Ecol Evol

January 2025

Wildlife Research Division Environment and Climate Change Canada Ottawa Ontario Canada.

For birds breeding in the Arctic, nest success is affected by the timing of nest initiation, which is partially determined by local conditions such as snow cover. However, conditions during the non-breeding season can carry over to affect the timing of breeding. We used tracking and breeding data from 248 individuals of 8 species and subspecies of Arctic-breeding shorebirds to estimate how the timing of nest initiation is related to local conditions like snowmelt phenology versus prior conditions, measured by the timing and speed of migration.

View Article and Find Full Text PDF

A highly visible-transparent thermochromic smart window with broadband infrared modulation for all-season energy savings.

Natl Sci Rev

February 2025

National Laboratory of Solid State Microstructures, College of Engineering and Applied Sciences, Jiangsu Key Laboratory of Artificial Functional Materials, Frontiers Science Center for Critical Earth Material Cycling, Collaborative Innovation Center of Advanced Microstructures, Nanjing University, Nanjing 210093, China.

Thermochromic smart windows effectively reduce the energy consumption for buildings through passive light modulation including the transmission of visible (T) and near-infrared (T) light, and the emissivity of mid-infrared (ε) light in response to ambient temperature change. However, thermochromic windows that maintain high T while modulating T and ε simultaneously are highly desirable but still challenging. Here, we develop a thermochromic smart window based on a two-way shape memory polymer to enable reversible transformation and achieve T modulation of 44.

View Article and Find Full Text PDF

Structural insights into mechanisms of zinc scavenging by the zincophore Pra1.

bioRxiv

January 2025

Faculty of Health and Life Sciences, Medical Research Council Centre for Medical Mycology, Geoffrey Pope Building, University of Exeter, Exeter, EX4 4QD, UK.

causes more than 400,000 life-threatening, and half a billion mucosal infections annually. In response to infection, the host limits availability of essential micronutrients, including zinc, to restrict growth of the invading pathogen. As assimilation of zinc is essential for pathogenicity, its limitation induces the secretion of the zincophore protein Pra1 to scavenge zinc from the host.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!