Information theoretical approach to single-molecule experimental design and interpretation.

J Phys Chem A

Rutgers-The State University of New Jersey, New Brunswick, Department of Chemistry and Chemical Biology and BIOMAPS Institute, 610 Taylor Road, Piscataway, NJ 08854, USA.

Published: August 2006

We use Shannon's definition of information to develop a theory to predict a photon-counting-based single-molecule experiment's ability to measure the desired property. We treat three phenomena that are commonly measured on single molecules: spectral fluctuations of a solvatochromic dye; assignment of the azimuthal dipole angle; determination of a distance by fluorescence resonant energy transfer using Förster's theory. We consider the effect of background and other "imperfections" on the measurement through the decrease in information.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1995558PMC
http://dx.doi.org/10.1021/jp062192bDOI Listing

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