OSIRIS: a tool for retrieving literature about sequence variants.

Bioinformatics

Research Unit on Biomedical Informatics (GRIB), IMIM Universitat Pompeu Fabra, carrer Dr Aiguader 88, E-08003 Barcelona, Spain.

Published: October 2006

Unlabelled: Sequence variants, in particular single nucleotide polymorphisms (SNPs), are key elements for the identification of genes associated with complex diseases and with particular drug responses. The search for literature about sequence variation is hampered by the large number of allelic variants reported for many genes and by the variability in both gene and sequence variants nomenclatures. We describe OSIRIS, a search tool that integrates different sources of information with the aim to retrieve literature about sequence variation of a gene. In addition, it provides a method to link a dbSNP entry with the articles referring to it.

Availability: OSIRIS is available for public use at http://ibi.imim.es/

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Source
http://dx.doi.org/10.1093/bioinformatics/btl421DOI Listing

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