Sequence analysis of the plasmid pColG from the Escherichia coli strain CA46.

Plasmid

Department of Biology, Biotechnical Faculty, University of Ljubljana, Vecna pot 111, 1000 Ljubljana, Slovenia.

Published: January 2007

The complete 4715 nucleotide sequence of the plasmid pColG from the Escherichia coli strain CA46, which was originally assumed to code for colicin G activity, has been determined. Based on the nucleotide sequence homology of the 1828bp replication region, with an average G+C content of 48%, pColG was classified as a ColE1-like plasmid. Computer assisted analysis of the remaining 2887bp nucleotide sequence with an average G+C content of 34% revealed three putative OFRs. To find out whether one or all of the three ORFs code for a possible bacteriocin, a DNA fragment encompassing these ORFs has been cloned and the recombinant colonies tested for bacteriocin production. None of the colonies had an inhibitory activity against E. coli strains DH5, HB101 and MC4100. The assumption that the plasmid pColG from the E. coli strain CA46 codes for a bacteriocin thus could not be confirmed.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.plasmid.2006.05.010DOI Listing

Publication Analysis

Top Keywords

plasmid pcolg
12
coli strain
12
strain ca46
12
nucleotide sequence
12
pcolg escherichia
8
escherichia coli
8
average g+c
8
g+c content
8
sequence
4
sequence analysis
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!