In this study, we investigated the role of selection in the maintenance of a dorsal colour polymorphism in natural populations of the northern leopard frog, Rana pipiens. We determined genetic structure both spatially and temporally from a suite of putatively neutral molecular markers and tested whether or not the colour locus exhibited patterns of genetic variation that differed from those of the neutral loci. Spatial genetic structure at the colour locus was indistinguishable from structure at neutral loci [95% confidence intervals of F(ST) (neutral) = (0.07, 0.35), F(ST) (colour locus) = 0.114]. In the temporal analysis, we found that the variance among populations in the change in allele frequency at the colour locus (equal to 0.004) lies within the 95% confidence intervals for the variance among populations in changes in allele frequencies at neutral loci. In light of our inability to show evidence for the selective maintenance of the colour polymorphism, we used computer simulations to infer the power of our spatial and temporal techniques to detect selection. The computer simulations showed that although the strength of selection (s) would need to be relatively strong to have been detected by the temporal approach (s = 0.1-0.4, depending on the model tested), the spatial analysis would have detected all but weak selection (s = 0.01-0.04, depending on the model tested). This study illustrates the importance of using a locus comparison approach to detect evidence for selective maintenance before conducting studies to measure the selective mechanisms maintaining a polymorphism.
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http://dx.doi.org/10.1111/j.1365-294X.2006.02934.x | DOI Listing |
PLoS Biol
January 2025
School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
The organization of the human genome in space and time is critical for transcriptional regulation and cell fate determination. However, robust methods for tracking genome organization or genomic interactions over time in living cells are lacking. Here, we developed a multicolor DNA labeling system, ParSite, to simultaneously track triple genomic loci in the U2OS cells.
View Article and Find Full Text PDFJ Fungi (Basel)
January 2025
Systematic Biology, Department of Organismal Biology, Uppsala University, Norbyvägen 18D, 75236 Uppsala, Sweden.
is known as a northern-hemisphere-distributed genus with important economic values, especially in Western China. However, its species diversity in Asia and the phylogeny of this genus have not been critically studied. Based on worldwide sampling and multi-locus DNA sequence data (ITS, LSU, , ), the phylogeny of was reconstructed, and the species diversity in Asia was critically studied on the basis of morphology and phylogeny.
View Article and Find Full Text PDFiScience
January 2025
Ningbo Sunpu Led Co., Ltd., Ningbo 315000, China.
Multiple channels are designed for dimmable LED light sources with color temperatures ranging from 2,700 to 6,500 K. However, issues such as Delta uv (D) values <0, lower brightness, luminous efficacy, and color rendering index (CRI), lower power density, exceeding the standard deviation of color matching (SDCM), unconstant power, poor color consistencies, and high costs persist. We present a three-channel LED light source featuring an integrated chip-on-board (COB) package structure.
View Article and Find Full Text PDFJ Nat Prod
January 2025
Fungal Natural Products Group, Westerdijk Fungal Biodiversity Institute, 3584 CT Utrecht, Netherlands.
Xylindein is a blue-green pigment produced by the fungi and Its stunning color and optoelectronic properties make xylindein valuable for textiles and as a natural semiconductor material. However, producing xylindein from culture broths remains challenging because of the slow growth of the species and the poor solubility of xylindein in organic solvents. An alternative production route for obtaining pure xylindein is heterologous expression of the xylindein biosynthetic genes.
View Article and Find Full Text PDFPlant Biotechnol J
January 2025
Department of Plant Breeding and Biotechnology, Centro IFAPA de Málaga, Andalusian Institute of Agricultural and Fisheries Research and Training (IFAPA), Málaga, Spain.
Carotenoids are a diverse group of pigments imparting red, orange, and yellow hues to many horticultural plants, also enhancing their nutritional properties and health benefits. In strawberry, the genetic and molecular mechanisms regulating the natural variation of fruit carotenoid composition remain largely unexplored. In this study, we use a population segregating in yellow/white flesh to detect a major quantitative trait locus (QTL), qYellow Flesh-4B, located on chromosome 4B and accounting for 82% of total phenotypic variation.
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