Insights into the chemomechanical coupling of the myosin motor from simulation of its ATP hydrolysis mechanism.

Biochemistry

Computational Biochemistry, Interdisciplinary Center for Scientific Computation, University of Heidelberg, Im Neuenheimer Feld 368, 69120 Heidelberg, Germany.

Published: May 2006

The molecular motor myosin converts chemical energy from ATP hydrolysis into mechanical work, thus driving a variety of essential motility processes. Although myosin function has been studied extensively, the catalytic mechanism of ATP hydrolysis and its chemomechanical coupling to the motor cycle are not completely understood. Here, the catalysis mechanism in myosin II is examined using quantum mechanical/molecular mechanical reaction path calculations. The resulting reaction pathways, found in the catalytically competent closed/closed conformation of the Switch-1/Switch-2 loops of myosin, are all associative with a pentavalent bipyramidal oxyphosphorane transition state but can vary in the activation mechanism of the attacking water molecule and in the way the hydrogens are transferred between the heavy atoms. The coordination bond between the Mg2+ metal cofactor and Ser237 in the Switch-1 loop is broken in the product state, thereby facilitating the opening of the Switch-1 loop after hydrolysis is completed, which is required for subsequent strong rebinding to actin. This reveals a key element of the chemomechanical coupling that underlies the motor cycle, namely, the modulation of actin unbinding or binding in response to the ATP or ADP x P(i) state of nucleotide-bound myosin.

Download full-text PDF

Source
http://dx.doi.org/10.1021/bi052433qDOI Listing

Publication Analysis

Top Keywords

chemomechanical coupling
12
atp hydrolysis
12
motor cycle
8
switch-1 loop
8
myosin
6
insights chemomechanical
4
coupling myosin
4
motor
4
myosin motor
4
motor simulation
4

Similar Publications

Facile Interfacial Reduction Suppresses Redox Chemical Expansion and Promotes the Polaronic to Ionic Transition in Mixed Conducting (Pr,Ce)O Nanoparticles.

ACS Appl Mater Interfaces

January 2025

Department of Materials Science & Engineering, The Grainger College of Engineering, University of Illinois Urbana-Champaign, 1304 W. Green Street, Urbana, Illinois 61801, United States.

Mixed ionic/electronic conductors (MIECs) are essential components of solid-state electrochemical devices, such as solid oxide fuel/electrolysis cells. For efficient performance, MIECs are typically nanostructured, to enhance the reaction kinetics. However, the effect of nanostructuring on MIEC chemo-mechanical coupling and transport properties, which also impact cell durability and efficiency, has not yet been well understood.

View Article and Find Full Text PDF

Erbium-doped thin-film lithium niobate (TFLN) lasers have attracted great interest in recent years due to their compatibility with high-speed electro-optic (EO) modulation on the same platform. In this work, high-efficiency single-mode erbium-doped microring lasers with milliwatt output powers were demonstrated. Monolithic lithium niobate microring resonators using pulley-waveguide-coupling were fabricated by the photolithography assisted chemo-mechanical etching (PLACE) technique.

View Article and Find Full Text PDF

The development of sustainable transportation and communication systems requires an increase in both energy density and capacity retention of Li-batteries. Using substrates forming a solid solution with body-centered cubic Li enhances the cycle stability of anode-less batteries. However, it remains unclear how the substrate microstructure affects the lithiation behavior.

View Article and Find Full Text PDF

Constrained mixture models have successfully simulated many cases of growth and remodeling in soft biological tissues. So far, extensions of these models have been proposed to include either intracellular signaling or chemo-mechanical coupling on the organ-scale. However, no version of constrained mixture models currently exists that includes both aspects.

View Article and Find Full Text PDF

Chemo-mechanical model of cell polarization initiated by structural polarity.

Soft Matter

October 2024

School of Mechanical and Aerospace Engineering, Jilin University, Changchun, China.

Article Synopsis
  • Cell polarization is essential for many physiological functions and is influenced by structural polarity, particularly during tumor metastasis when cells attach and migrate.
  • This study establishes a multiscale model to investigate the chemo-mechanical mechanisms underlying cell polarization, integrating structural polarity with the reaction-diffusion dynamics of the Rho GTPase Cdc42.
  • The findings suggest that initial structural polarity drives cell polarization and movement, with factors like ECM stiffness and bistability in Cdc42 activation playing key roles in regulating the cell's polarized morphology.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!